Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
KRTAP4-4Q9BYR3 AC073136.1-201ENST00000449426 2884 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC140479.2-201ENST00000421567 3130 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 MTHFD1P1-201ENST00000413059 2764 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR126-201ENST00000362291 85 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU6-600P-201ENST00000362524 99 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RNA5SP260-201ENST00000363849 111 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU4-7P-201ENST00000364758 141 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 SNORA70.5-201ENST00000365519 135 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU6-1039P-201ENST00000383931 107 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 Y_RNA.520-201ENST00000384556 102 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR29B1-201ENST00000385015 81 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR95-201ENST00000385072 81 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RNA5SP185-201ENST00000390963 114 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 SNORA2C-201ENST00000408564 137 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SKP117-201ENST00000410175 264 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RNA5SP251-201ENST00000410614 137 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 ATP5A1P2-201ENST00000412323 255 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 MICG-208ENST00000416822 132 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RPS26P5-201ENST00000418544 335 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC113412.1-201ENST00000425840 504 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 PPIAP13-201ENST00000434706 478 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 MRPS21P1-201ENST00000453850 223 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RPL10P17-201ENST00000453852 316 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SL233P-201ENST00000469988 277 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RPL23AP42-201ENST00000471152 471 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 SNRPCP3-201ENST00000474888 476 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RPS27P22-201ENST00000478056 241 ntBASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC1.33□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SL152P-201ENST00000484176 298 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms