Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.08□□□□□ -2.4
COL12A1Q99715 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
COL12A1Q99715 RNU6-1155P-201ENST00000363554 107 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 U8.7-201ENST00000364940 136 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 RNY4P28-201ENST00000365281 93 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 AC244023.1-201ENST00000426884 112 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 AP000797.1-201ENST00000478870 387 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.08□□□□□ -2.4
COL12A1Q99715 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.08□□□□□ -2.4
COL12A1Q99715 MIR4764-201ENST00000580680 88 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 HMGN2P15-201ENST00000585707 270 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.08□□□□□ -2.4
COL12A1Q99715 AC242498.1-201ENST00000604134 111 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 AC100812.1-201ENST00000607622 580 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 AC090517.2-201ENST00000614966 680 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 AC243994.1-201ENST00000618627 109 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 MIR8065-201ENST00000620577 100 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 MIR7157-201ENST00000635801 60 ntBASIC0.08□□□□□ -2.4
COL12A1Q99715 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.08□□□□□ -2.4
COL12A1Q99715 SNORD114-28-201ENST00000363610 72 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.07□□□□□ -2.4
COL12A1Q99715 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.07□□□□□ -2.4
COL12A1Q99715 GTF2IP13-201ENST00000438487 386 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 PGBD4P5-201ENST00000445958 426 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.07□□□□□ -2.4
COL12A1Q99715 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.07□□□□□ -2.4
COL12A1Q99715 RNY4-201ENST00000516507 96 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.07□□□□□ -2.4
COL12A1Q99715 BNIP3P31-201ENST00000604515 566 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 AC023934.1-201ENST00000574529 2389 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
COL12A1Q99715 MIR411-201ENST00000362239 96 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 RNU6-26P-201ENST00000383985 107 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 RNU6-40P-201ENST00000384254 107 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 HNRNPDP2-201ENST00000406475 478 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 RPS26P45-201ENST00000471748 340 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 HMGB1P36-201ENST00000487709 576 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 AC093677.1-201ENST00000514414 678 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 SCARNA11.3-201ENST00000517276 130 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.07□□□□□ -2.4
COL12A1Q99715 AC022254.1-201ENST00000567857 235 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.07□□□□□ -2.4
COL12A1Q99715 AC073544.2-201ENST00000601155 540 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 AC113194.1-201ENST00000606037 500 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 AL138478.1-201ENST00000612252 832 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 RNU4-48P-201ENST00000365559 182 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.07□□□□□ -2.4
COL12A1Q99715 USP9YP21-201ENST00000420603 432 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.07□□□□□ -2.4
COL12A1Q99715 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.07□□□□□ -2.4
COL12A1Q99715 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.07□□□□□ -2.4
COL12A1Q99715 RAP1BP2-201ENST00000478270 544 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 BET1P1-201ENST00000482276 359 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 SCARNA16.5-201ENST00000517114 183 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.07□□□□□ -2.4
COL12A1Q99715 AC007751.1-201ENST00000529260 376 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.07□□□□□ -2.4
COL12A1Q99715 AC107954.1-201ENST00000565906 727 ntBASIC0.07□□□□□ -2.4
COL12A1Q99715 SNORA32.3-201ENST00000384772 121 ntBASIC0.06□□□□□ -2.4
COL12A1Q99715 RNU2-63P-201ENST00000410792 194 ntBASIC0.06□□□□□ -2.4
COL12A1Q99715 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
COL12A1Q99715 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.06□□□□□ -2.4
COL12A1Q99715 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.06□□□□□ -2.4
COL12A1Q99715 AF213884.2-201ENST00000510417 903 ntBASIC0.06□□□□□ -2.4
COL12A1Q99715 OR8K2P-201ENST00000524645 927 ntBASIC0.06□□□□□ -2.4
COL12A1Q99715 AC005832.3-201ENST00000537929 631 ntBASIC0.06□□□□□ -2.4
COL12A1Q99715 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.06□□□□□ -2.4
COL12A1Q99715 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.06□□□□□ -2.4
COL12A1Q99715 AC004852.3-201ENST00000614131 326 ntBASIC0.06□□□□□ -2.4
COL12A1Q99715 AC123767.1-202ENST00000620407 817 ntBASIC0.06□□□□□ -2.4
COL12A1Q99715 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
COL12A1Q99715 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
COL12A1Q99715 AC096656.1-201ENST00000623826 1364 ntBASIC0.06□□□□□ -2.4
COL12A1Q99715 AL359704.1-201ENST00000411586 781 ntBASIC0.06□□□□□ -2.4
COL12A1Q99715 AC069282.1-201ENST00000411911 526 ntBASIC0.06□□□□□ -2.4
COL12A1Q99715 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.06□□□□□ -2.4
COL12A1Q99715 AL512844.2-201ENST00000433990 593 ntBASIC0.06□□□□□ -2.4
COL12A1Q99715 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
COL12A1Q99715 RNU6-271P-201ENST00000363858 105 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 Y_RNA.346-201ENST00000365385 112 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 RNU6-968P-201ENST00000384076 107 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 RNU4-63P-201ENST00000411313 118 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.05□□□□□ -2.4
COL12A1Q99715 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
COL12A1Q99715 AC011406.1-201ENST00000512440 370 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 RN7SKP5-201ENST00000517045 272 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.05□□□□□ -2.4
COL12A1Q99715 EIF1P4-201ENST00000572664 335 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 AC136618.2-201ENST00000575091 400 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.05□□□□□ -2.4
COL12A1Q99715 RNU6-657P-201ENST00000383904 107 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 Y_RNA.551-201ENST00000384661 102 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 MIR19B1-201ENST00000384829 87 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.05□□□□□ -2.4
COL12A1Q99715 MTND4P19-201ENST00000446659 478 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 snoU13.4-201ENST00000458916 104 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 SNORD54-201ENST00000459159 67 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 RNU6-1037P-201ENST00000459571 107 ntBASIC0.05□□□□□ -2.4
COL12A1Q99715 RPL26P26-201ENST00000480251 434 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms