Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AL121917.1-203ENST00000605534 577 ntBASIC2.53□□□□□ -2
RAB3IPQ96QF0 AL442067.2-201ENST00000614033 363 ntBASIC2.53□□□□□ -2
RAB3IPQ96QF0 RMST_4.1-201ENST00000616886 107 ntBASIC2.53□□□□□ -2
RAB3IPQ96QF0 MIR5739-201ENST00000619803 80 ntBASIC2.53□□□□□ -2
RAB3IPQ96QF0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.53□□□□□ -2
RAB3IPQ96QF0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
RAB3IPQ96QF0 ZNF680P1-201ENST00000436625 1469 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 RNU6-1303P-201ENST00000364841 107 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 SNORD116-9-201ENST00000384000 95 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 SNORD116-2-201ENST00000384274 95 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 SNORD116-3-201ENST00000384287 95 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 SNORD116-7-201ENST00000384404 95 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 SNORD116-5-201ENST00000384462 95 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 SNORD116-6-201ENST00000384711 96 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AL162578.1-201ENST00000406202 378 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 RPS4XP7-201ENST00000406274 780 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 RAP1BP3-201ENST00000407180 549 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 RNU2-3P-201ENST00000410144 191 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 RNU4-46P-201ENST00000410818 138 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 CYCSP33-201ENST00000414485 327 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 MTATP6P18-201ENST00000417994 673 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AL669831.1-202ENST00000428504 417 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 SUMO1P4-201ENST00000429430 302 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 GTF2IP13-201ENST00000438487 386 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AC079382.1-201ENST00000493346 557 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 SNORA31.23-201ENST00000517219 133 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 RN7SKP57-201ENST00000517248 293 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 PSMA3P-201ENST00000555485 635 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AC007336.1-201ENST00000576365 3828 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AC073410.2-201ENST00000603240 332 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AL355297.2-201ENST00000604792 129 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 SNORD14A-201ENST00000606526 91 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AL031601.2-202ENST00000622650 282 ntBASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RAB3IPQ96QF0 AC005336.3-201ENST00000623833 2679 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AC000403.1-201ENST00000613696 3585 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 MIR422A-201ENST00000362286 90 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 SNORA70.4-201ENST00000365509 134 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 RNU6-1032P-201ENST00000384100 107 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 SNORD116-1-201ENST00000384335 95 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 SNORA11.1-201ENST00000408133 129 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AL139109.1-201ENST00000455491 297 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AC006026.2-201ENST00000457376 180 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 RPS3AP17-201ENST00000472594 777 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 MTCO3P9-201ENST00000506989 781 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 HMGB3P3-201ENST00000510526 400 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AC079140.3-201ENST00000511111 550 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AC010493.1-201ENST00000513479 292 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 RNA5SP367-201ENST00000516557 118 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 RNU1-104P-201ENST00000517280 175 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AC027176.1-201ENST00000560204 514 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 LRRC37A5P-203ENST00000580181 585 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AL161756.2-201ENST00000604597 246 ntBASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.51□□□□□ -2.01
RAB3IPQ96QF0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RAB3IPQ96QF0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RAB3IPQ96QF0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
RAB3IPQ96QF0 SNORD56.1-201ENST00000362913 68 ntBASIC2.5□□□□□ -2.01
RAB3IPQ96QF0 RNU6-1120P-201ENST00000362988 108 ntBASIC2.5□□□□□ -2.01
RAB3IPQ96QF0 Y_RNA.159-201ENST00000363674 87 ntBASIC2.5□□□□□ -2.01
RAB3IPQ96QF0 RNU1-57P-201ENST00000384491 166 ntBASIC2.5□□□□□ -2.01
RAB3IPQ96QF0 RNU6-606P-201ENST00000384721 111 ntBASIC2.5□□□□□ -2.01
RAB3IPQ96QF0 SNORA48.5-201ENST00000391143 135 ntBASIC2.5□□□□□ -2.01
RAB3IPQ96QF0 AC068050.1-201ENST00000394891 380 ntBASIC2.5□□□□□ -2.01
RAB3IPQ96QF0 AL591416.1-201ENST00000404015 867 ntBASIC2.5□□□□□ -2.01
RAB3IPQ96QF0 AL138885.1-201ENST00000405921 675 ntBASIC2.5□□□□□ -2.01
RAB3IPQ96QF0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.5□□□□□ -2.01
RAB3IPQ96QF0 CDK8P2-201ENST00000415020 547 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms