Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CHFRQ96EP1 AC103710.2-202ENST00000641454 2853 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 AC008669.1-201ENST00000565823 2178 ntBASIC3.75□□□□□ -1.81
CHFRQ96EP1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CHFRQ96EP1 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHFRQ96EP1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHFRQ96EP1 RNU1-33P-201ENST00000364249 162 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 Y_RNA.297-201ENST00000364950 91 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 RNU2-33P-201ENST00000410344 192 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.74□□□□□ -1.81
CHFRQ96EP1 RPL23AP69-201ENST00000431134 458 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.74□□□□□ -1.81
CHFRQ96EP1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.74□□□□□ -1.81
CHFRQ96EP1 AC013470.1-201ENST00000453438 462 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 snoU13.4-201ENST00000458916 104 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 RNU7-59P-201ENST00000459101 61 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 RNU7-167P-201ENST00000459160 62 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 snoU13.3-201ENST00000459441 104 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 AC026801.1-201ENST00000497178 464 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 RNU6-397P-201ENST00000516226 104 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 RNU6-307P-201ENST00000516743 106 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 RNU6-897P-201ENST00000517135 105 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 RNU6-323P-201ENST00000521915 107 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.74□□□□□ -1.81
CHFRQ96EP1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.74□□□□□ -1.81
CHFRQ96EP1 MIR4474-201ENST00000579189 78 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 AC006077.1-201ENST00000604746 343 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 AC009570.1-201ENST00000609599 745 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 U2.17-201ENST00000611454 95 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 AC092628.2-201ENST00000622492 339 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.74□□□□□ -1.81
CHFRQ96EP1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.74□□□□□ -1.81
CHFRQ96EP1 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.74□□□□□ -1.81
CHFRQ96EP1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CHFRQ96EP1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CHFRQ96EP1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.74□□□□□ -1.81
CHFRQ96EP1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CHFRQ96EP1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CHFRQ96EP1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CHFRQ96EP1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CHFRQ96EP1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 RNU6-545P-201ENST00000362681 104 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 RNU6-960P-201ENST00000364056 120 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 RNY1-201ENST00000364228 113 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 RNU4-65P-201ENST00000410473 140 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 RNU6-121P-201ENST00000410525 99 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 HMGN1P24-201ENST00000412282 298 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 BX842559.1-201ENST00000419615 532 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 AC005300.1-201ENST00000428401 373 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 AC098831.1-201ENST00000440661 216 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 NDUFB1P2-201ENST00000449477 176 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 SSXP4-201ENST00000451349 245 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 LINC01399-202ENST00000458450 244 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 SNORD121B-201ENST00000458838 81 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 TRBVB-201ENST00000477100 408 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 AC011005.2-201ENST00000487324 359 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 AC096745.1-201ENST00000509945 370 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 RNU2-69P-201ENST00000516061 100 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 AP003733.2-201ENST00000529409 171 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 AC026371.1-201ENST00000551867 419 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 AC010620.2-201ENST00000600135 313 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 AP000553.6-201ENST00000641242 118 ntBASIC3.73□□□□□ -1.81
CHFRQ96EP1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CHFRQ96EP1 HSPA8P1-201ENST00000425843 1833 ntBASIC3.72□□□□□ -1.81
CHFRQ96EP1 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CHFRQ96EP1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CHFRQ96EP1 SNORD58.1-201ENST00000391313 66 ntBASIC3.72□□□□□ -1.81
CHFRQ96EP1 RNU6-387P-201ENST00000411331 105 ntBASIC3.72□□□□□ -1.81
CHFRQ96EP1 RPL21P38-201ENST00000418090 167 ntBASIC3.72□□□□□ -1.81
CHFRQ96EP1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.72□□□□□ -1.81
CHFRQ96EP1 MYL8P-204ENST00000431574 518 ntBASIC3.72□□□□□ -1.81
CHFRQ96EP1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.72□□□□□ -1.81
CHFRQ96EP1 MTCO3P8-201ENST00000453691 755 ntBASIC3.72□□□□□ -1.81
CHFRQ96EP1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.72□□□□□ -1.81
CHFRQ96EP1 AC093767.1-201ENST00000504523 156 ntBASIC3.72□□□□□ -1.81
CHFRQ96EP1 RNU6-798P-201ENST00000516912 103 ntBASIC3.72□□□□□ -1.81
CHFRQ96EP1 RNU6-1092P-201ENST00000516955 87 ntBASIC3.72□□□□□ -1.81
CHFRQ96EP1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.72□□□□□ -1.81
CHFRQ96EP1 AL133271.1-201ENST00000538229 291 ntBASIC3.72□□□□□ -1.81
CHFRQ96EP1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.72□□□□□ -1.81
CHFRQ96EP1 AC106782.4-201ENST00000568264 210 ntBASIC3.72□□□□□ -1.81
CHFRQ96EP1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.72□□□□□ -1.81
CHFRQ96EP1 AP001282.2-201ENST00000616149 309 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms