Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.01□□□□□ -2.09
RNF139Q8WU17 AL773524.1-201ENST00000614065 229 ntBASIC2.01□□□□□ -2.09
RNF139Q8WU17 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.01□□□□□ -2.09
RNF139Q8WU17 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.01□□□□□ -2.09
RNF139Q8WU17 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.01□□□□□ -2.09
RNF139Q8WU17 AC008993.2-201ENST00000631744 806 ntBASIC2.01□□□□□ -2.09
RNF139Q8WU17 MIR3529-201ENST00000637713 78 ntBASIC2.01□□□□□ -2.09
RNF139Q8WU17 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RNF139Q8WU17 MIR583-201ENST00000384846 75 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 RNU2-20P-201ENST00000410425 191 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 RPL23AP39-201ENST00000415533 405 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 AC006366.1-201ENST00000422002 759 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2□□□□□ -2.09
RNF139Q8WU17 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2□□□□□ -2.09
RNF139Q8WU17 AL593851.1-201ENST00000426171 157 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 ZNF736P5Y-201ENST00000451173 805 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 AC012308.1-201ENST00000451232 178 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2□□□□□ -2.09
RNF139Q8WU17 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2□□□□□ -2.09
RNF139Q8WU17 MTND1P3-201ENST00000484956 952 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 MTCYBP35-201ENST00000503630 1137 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 RNU6-1129P-201ENST00000515964 104 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 RNA5SP182-201ENST00000516064 82 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2□□□□□ -2.09
RNF139Q8WU17 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2□□□□□ -2.09
RNF139Q8WU17 AC002400.1-201ENST00000569310 726 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 AP001004.1-201ENST00000582468 324 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 AC112187.2-201ENST00000604345 283 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 AC021646.1-201ENST00000605469 484 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 AC018638.7-201ENST00000605836 1114 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 USP12-203ENST00000620323 349 ntTSL 3 BASIC2□□□□□ -2.09
RNF139Q8WU17 AC092192.1-201ENST00000633154 1018 ntBASIC2□□□□□ -2.09
RNF139Q8WU17 HAUS6P2-201ENST00000433254 2404 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 RNU6-500P-201ENST00000362349 107 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 RNU6-1010P-201ENST00000362757 107 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 RNU6-395P-201ENST00000365662 106 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 RNU1-57P-201ENST00000384491 166 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 Y_RNA.534-201ENST00000384599 112 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 MIR29C-201ENST00000385231 88 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 MIR1289-2-201ENST00000408360 111 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 RNU2-40P-201ENST00000410833 196 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 HMGB3P2-201ENST00000411913 584 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RNF139Q8WU17 AC011233.1-201ENST00000422812 283 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 AL591212.2-201ENST00000433923 257 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.99□□□□□ -2.09
RNF139Q8WU17 MTND5P2-201ENST00000442927 1142 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 GDI2P2-201ENST00000445131 608 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.99□□□□□ -2.09
RNF139Q8WU17 AC245102.2-201ENST00000448956 180 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF139Q8WU17 RPL23AP42-201ENST00000471152 471 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 RPL21P99-201ENST00000480369 423 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF139Q8WU17 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF139Q8WU17 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.99□□□□□ -2.09
RNF139Q8WU17 SNORA3.4-201ENST00000515969 96 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 RNU6-586P-201ENST00000517265 104 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 MTATP6P15-201ENST00000527233 835 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF139Q8WU17 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
RNF139Q8WU17 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.99□□□□□ -2.09
RNF139Q8WU17 ZNF321P-202ENST00000550843 495 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 AL157871.3-201ENST00000557231 293 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 MIR1273C-201ENST00000578669 77 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
RNF139Q8WU17 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF139Q8WU17 AC073410.2-201ENST00000603240 332 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
RNF139Q8WU17 AC092656.1-203ENST00000624134 423 ntBASIC1.99□□□□□ -2.09
RNF139Q8WU17 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RNF139Q8WU17 AC002543.1-201ENST00000299783 1954 ntBASIC1.98□□□□□ -2.09
RNF139Q8WU17 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RNF139Q8WU17 AL356292.1-201ENST00000283110 373 ntBASIC1.98□□□□□ -2.09
RNF139Q8WU17 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RNF139Q8WU17 RNA5SP276-201ENST00000362580 94 ntBASIC1.98□□□□□ -2.09
RNF139Q8WU17 Y_RNA.33-201ENST00000362591 102 ntBASIC1.98□□□□□ -2.09
RNF139Q8WU17 Y_RNA.46-201ENST00000362695 102 ntBASIC1.98□□□□□ -2.09
RNF139Q8WU17 AC244636.1-201ENST00000421152 228 ntBASIC1.98□□□□□ -2.09
RNF139Q8WU17 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF139Q8WU17 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF139Q8WU17 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.98□□□□□ -2.09
RNF139Q8WU17 AC018868.1-201ENST00000491307 315 ntBASIC1.98□□□□□ -2.09
RNF139Q8WU17 AC110588.1-201ENST00000559699 137 ntBASIC1.98□□□□□ -2.09
RNF139Q8WU17 RPL30P11-203ENST00000598995 310 ntBASIC1.98□□□□□ -2.09
RNF139Q8WU17 AL353778.1-201ENST00000603149 408 ntBASIC1.98□□□□□ -2.09
RNF139Q8WU17 ELOCP5-201ENST00000604924 333 ntBASIC1.98□□□□□ -2.09
RNF139Q8WU17 AL391813.2-201ENST00000609113 322 ntBASIC1.98□□□□□ -2.09
RNF139Q8WU17 AC098657.3-201ENST00000620434 263 ntBASIC1.98□□□□□ -2.09
RNF139Q8WU17 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF139Q8WU17 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RNF139Q8WU17 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
RNF139Q8WU17 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RNF139Q8WU17 RNU6-487P-201ENST00000365430 104 ntBASIC1.97□□□□□ -2.09
RNF139Q8WU17 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RNF139Q8WU17 MIR504-201ENST00000385065 83 ntBASIC1.97□□□□□ -2.09
RNF139Q8WU17 SNORA40.18-201ENST00000391200 128 ntBASIC1.97□□□□□ -2.09
RNF139Q8WU17 RNA5SP212-201ENST00000391223 107 ntBASIC1.97□□□□□ -2.09
RNF139Q8WU17 RNU6-1025P-201ENST00000410629 104 ntBASIC1.97□□□□□ -2.09
RNF139Q8WU17 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms