Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 EIF1P1-201ENST00000421436 341 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.23□□□□□ -1.89
USP38Q8NB14 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.23□□□□□ -1.89
USP38Q8NB14 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.23□□□□□ -1.89
USP38Q8NB14 RPS15AP5-201ENST00000436276 388 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 BRK1P2-201ENST00000442875 223 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 AC233279.1-201ENST00000455300 423 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 RN7SL633P-201ENST00000488974 297 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 MTCO3P9-201ENST00000506989 781 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 RNU6-835P-201ENST00000516974 104 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 RNU6-56P-201ENST00000516986 93 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 RNU6-1183P-201ENST00000517054 60 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 MTND4LP26-201ENST00000518144 282 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 MTND4P7-201ENST00000523876 130 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 AL157687.1-201ENST00000554853 619 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 AC015712.3-201ENST00000559380 164 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.23□□□□□ -1.89
USP38Q8NB14 SNORD53-201ENST00000579969 78 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 MIR3199-2-201ENST00000636243 86 ntBASIC3.23□□□□□ -1.89
USP38Q8NB14 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
USP38Q8NB14 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.22□□□□□ -1.89
USP38Q8NB14 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.22□□□□□ -1.89
USP38Q8NB14 Y_RNA.38-201ENST00000362617 102 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 RNU6-393P-201ENST00000384475 107 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
USP38Q8NB14 RNU6-1068P-201ENST00000410958 103 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.22□□□□□ -1.89
USP38Q8NB14 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.22□□□□□ -1.89
USP38Q8NB14 USP9YP18-201ENST00000425912 695 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 AL121601.2-201ENST00000438019 707 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 RPL23AP58-201ENST00000440453 469 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 AL360271.2-201ENST00000447710 161 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 MTATP6P7-201ENST00000453315 681 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 MTND3P25-201ENST00000509243 135 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 AC008716.1-201ENST00000511084 513 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 RAC1P5-201ENST00000512182 576 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 AC011352.1-201ENST00000512300 793 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 RNU6-1038P-201ENST00000516516 104 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 RNU6-703P-201ENST00000516946 107 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.22□□□□□ -1.89
USP38Q8NB14 AL137161.1-201ENST00000532231 390 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.22□□□□□ -1.89
USP38Q8NB14 AC012119.1-201ENST00000603184 222 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 AL355877.2-201ENST00000603670 358 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 AC092794.1-201ENST00000612734 582 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.22□□□□□ -1.89
USP38Q8NB14 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
USP38Q8NB14 AC010680.1-201ENST00000590024 3590 ntBASIC3.22□□□□□ -1.89
USP38Q8NB14 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
USP38Q8NB14 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
USP38Q8NB14 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.22□□□□□ -1.89
USP38Q8NB14 AC091564.4-201ENST00000533934 2194 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 AC093536.2-201ENST00000565257 1406 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 AC110491.1-201ENST00000562191 2010 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
USP38Q8NB14 MIR412-201ENST00000362142 91 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 RNU1-105P-201ENST00000363470 161 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 SNORA40C-201ENST00000391285 128 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 SNORA3.2-201ENST00000408221 125 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 BPY2DP-201ENST00000422208 265 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 HMGB1P9-201ENST00000429856 646 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.21□□□□□ -1.9
USP38Q8NB14 MTATP6P13-201ENST00000438531 667 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.21□□□□□ -1.9
USP38Q8NB14 AL590639.1-201ENST00000456484 337 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.21□□□□□ -1.9
USP38Q8NB14 RPS29P12-201ENST00000460178 152 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.21□□□□□ -1.9
USP38Q8NB14 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
USP38Q8NB14 AC104136.1-201ENST00000512969 394 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 RNU6-548P-201ENST00000517083 115 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.21□□□□□ -1.9
USP38Q8NB14 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.21□□□□□ -1.9
USP38Q8NB14 AC073539.2-201ENST00000597113 165 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.21□□□□□ -1.9
USP38Q8NB14 AL160394.1-201ENST00000624765 724 ntBASIC3.21□□□□□ -1.9
USP38Q8NB14 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
USP38Q8NB14 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USP38Q8NB14 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.2□□□□□ -1.9
USP38Q8NB14 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP38Q8NB14 AL139276.1-201ENST00000311910 1001 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP38Q8NB14 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
USP38Q8NB14 RNY4P14-201ENST00000363656 96 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 RNU6-898P-201ENST00000365627 104 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 U8.9-201ENST00000365667 134 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 RNU6-166P-201ENST00000384371 107 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 RNU6-434P-201ENST00000384376 107 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 RNU6-1127P-201ENST00000384580 107 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 Y_RNA.573-201ENST00000384763 105 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 MIR10A-201ENST00000385043 110 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 MIR34A-201ENST00000385130 110 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 MIR181B1-201ENST00000385240 110 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 SNORA26.7-201ENST00000391288 122 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.2□□□□□ -1.9
USP38Q8NB14 Y_RNA.623-201ENST00000411128 95 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 PGBD4P6-201ENST00000421501 610 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 AC087499.2-201ENST00000432861 149 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 RPL21P2-201ENST00000440049 481 ntBASIC3.2□□□□□ -1.9
USP38Q8NB14 RPS15AP27-201ENST00000449183 343 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms