Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.87□□□□□ -1.79
SYNPOQ8N3V7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 RNU6-105P-201ENST00000363909 104 ntBASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 RNU1-140P-201ENST00000365040 165 ntBASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 RNU6-19P-201ENST00000384718 107 ntBASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 RPL31P12-201ENST00000422587 358 ntBASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 AL133396.1-201ENST00000432048 687 ntBASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 MED28P2-201ENST00000475771 317 ntBASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 PTP4A1P4-201ENST00000512479 322 ntBASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 RNU5F-8P-201ENST00000515941 111 ntBASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 SNORA31.18-201ENST00000517043 134 ntBASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 AL360157.1-201ENST00000565962 87 ntBASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 UBE3AP2-201ENST00000429033 2259 ntBASIC3.86□□□□□ -1.79
SYNPOQ8N3V7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 MTND5P19-201ENST00000424872 1794 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 Y_RNA.48-201ENST00000362710 103 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 Y_RNA.187-201ENST00000363918 113 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 RNA5SP51-201ENST00000364750 119 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 MIR147B-201ENST00000390185 80 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 MTHFD2P2-201ENST00000407725 247 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 AC245291.1-201ENST00000419501 328 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 AL136097.1-201ENST00000456945 913 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 FO393415.2-201ENST00000480085 343 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 AC114801.2-201ENST00000503825 781 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 AC097473.1-201ENST00000508142 408 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 SCARNA16.2-201ENST00000516520 172 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 SNORD59.2-201ENST00000516873 68 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 AC022695.1-201ENST00000522089 237 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 AC009163.5-201ENST00000575421 637 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 AC078795.3-201ENST00000602913 472 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 MTND5P10-201ENST00000603719 1809 ntBASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SYNPOQ8N3V7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 Y_RNA.138-201ENST00000363462 102 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 RNU1-105P-201ENST00000363470 161 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 SNORA14A-201ENST00000364773 135 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 RNU6-890P-201ENST00000384121 107 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 RNVU1-14-201ENST00000384770 164 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 AL133475.1-201ENST00000404414 305 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 MIR1302-11-201ENST00000408051 138 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 MIR1302-9-201ENST00000408365 138 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 MIR1302-10-201ENST00000408734 138 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 RAC1P3-201ENST00000416129 580 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 AF228730.4-201ENST00000421457 183 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 USMG5P1-201ENST00000425964 177 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 CYCSP4-201ENST00000429682 331 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 ATP5HP2-201ENST00000433885 485 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 AC013470.1-201ENST00000453438 462 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 RNA5SP384-201ENST00000516615 116 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 AC025281.1-201ENST00000567026 265 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 MIR3922-201ENST00000585192 84 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 MIR1302-2-201ENST00000607096 138 ntBASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.84□□□□□ -1.79
SYNPOQ8N3V7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
SYNPOQ8N3V7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SYNPOQ8N3V7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.84□□□□□ -1.8
SYNPOQ8N3V7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 AC010889.1-201ENST00000566193 2666 ntBASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SYNPOQ8N3V7 RNA5SP267-201ENST00000364893 126 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms