Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SNORD116-3-201ENST00000384287 95 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 SNORD116-7-201ENST00000384404 95 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 SNORD116-5-201ENST00000384462 95 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 MIR181A2-201ENST00000384863 110 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 SNORA40.19-201ENST00000390846 128 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 USP9YP18-201ENST00000425912 695 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AC005326.1-201ENST00000429197 123 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AC073464.1-201ENST00000429823 534 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AL358934.1-201ENST00000432346 324 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AL591043.1-201ENST00000432461 424 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AC007969.2-201ENST00000441891 191 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 IPO7P1-201ENST00000442031 636 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 MTCO3P7-201ENST00000510008 774 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 TBCAP3-201ENST00000512475 312 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 SCARNA13-201ENST00000516672 275 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AC023050.3-201ENST00000541142 333 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 NDUFA5P6-201ENST00000542110 379 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 MIR3126-201ENST00000577443 74 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 MIR4697-201ENST00000582977 78 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 VN1R107P-201ENST00000601784 209 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AC025449.1-201ENST00000603896 529 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AL670379.2-201ENST00000604983 252 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.9□□□□□ -2.11
LINC01561Q8N1V8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 MTND4P14-201ENST00000435799 1354 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 SNORD56.1-201ENST00000362913 68 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 SNORA25B-201ENST00000365507 128 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 SNORA54-201ENST00000384281 123 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 RNU6-1127P-201ENST00000384580 107 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 RNU6-1222P-201ENST00000384615 107 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 MIR449B-201ENST00000384995 97 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 RPS4XP8-201ENST00000402039 771 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 SNORD23.1-201ENST00000408212 104 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 CDK8P2-201ENST00000415020 547 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 EDDM3CP-201ENST00000415977 425 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AIMP1P2-201ENST00000425294 312 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC091390.1-201ENST00000433904 331 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC112220.1-201ENST00000434628 355 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC003982.1-202ENST00000469928 248 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 RPL23AP49-201ENST00000492925 468 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC010424.1-201ENST00000506336 297 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 RNU2-69P-201ENST00000516061 100 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 RN7SKP219-201ENST00000516825 296 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 COPS8P3-201ENST00000526024 482 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC115990.1-201ENST00000526957 301 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AP005435.4-201ENST00000529514 284 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AL137161.1-201ENST00000532231 390 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC018630.3-201ENST00000542637 96 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 MYL12BP1-201ENST00000569826 507 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC091135.1-201ENST00000585943 307 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 ZNF861P-201ENST00000588126 639 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 NDUFA8P1-201ENST00000605525 367 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC245008.1-201ENST00000608123 476 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC104237.2-201ENST00000612456 443 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 MIR7975-201ENST00000619350 68 ntBASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LINC01561Q8N1V8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01561Q8N1V8 MTCO1P12-201ENST00000414273 1543 ntBASIC1.88□□□□□ -2.11
LINC01561Q8N1V8 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.88□□□□□ -2.11
LINC01561Q8N1V8 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
LINC01561Q8N1V8 Y_RNA.159-201ENST00000363674 87 ntBASIC1.88□□□□□ -2.11
LINC01561Q8N1V8 RNU1-91P-201ENST00000364746 163 ntBASIC1.88□□□□□ -2.11
LINC01561Q8N1V8 SNORA48.5-201ENST00000391143 135 ntBASIC1.88□□□□□ -2.11
LINC01561Q8N1V8 RNU6-1140P-201ENST00000410517 106 ntBASIC1.88□□□□□ -2.11
LINC01561Q8N1V8 RNU6-1245P-201ENST00000411130 106 ntBASIC1.88□□□□□ -2.11
LINC01561Q8N1V8 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01561Q8N1V8 MTCO2P34-201ENST00000421994 607 ntBASIC1.88□□□□□ -2.11
LINC01561Q8N1V8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01561Q8N1V8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.88□□□□□ -2.11
LINC01561Q8N1V8 MTCO1P19-201ENST00000443487 500 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms