Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 FABP5P15-201ENST00000453566 214 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 RPS23P7-201ENST00000466210 444 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 AC022616.8-201ENST00000533569 253 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 AC093249.4-201ENST00000564755 259 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 AC022968.1-201ENST00000567372 442 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 AC022441.3-201ENST00000605737 136 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 AL022401.1-201ENST00000619498 108 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 ZNF962P-201ENST00000443465 3140 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 AL365440.1-201ENST00000436135 2167 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 CUL1P1-201ENST00000509510 2425 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 MAPK10-304ENST00000641341 3984 ntBASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXR1Q6PIV2 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 RNU6-1272P-201ENST00000362776 107 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 RNU6-78P-201ENST00000362897 107 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 RNU4-17P-201ENST00000365598 141 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 MIR539-201ENST00000365690 78 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 RNU6-166P-201ENST00000384371 107 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 MIR513C-201ENST00000401352 84 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 RAB9AP3-201ENST00000412737 573 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 RAB9AP1-201ENST00000449393 573 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 EEF1B2P7-201ENST00000451177 676 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 AC079168.2-201ENST00000453977 416 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 HSPE1P6-201ENST00000479457 291 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 RNU6-709P-201ENST00000517257 104 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 IFITM8P-201ENST00000522529 394 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 AC127455.1-201ENST00000565496 145 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 MIR4277-201ENST00000578298 84 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 AC002545.1-201ENST00000592511 181 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 AC241585.2-209ENST00000638217 143 ntBASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXR1Q6PIV2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 AL590240.1-201ENST00000334118 313 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 RNA5SP267-201ENST00000364893 126 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 RNU6-1286P-201ENST00000383871 107 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 RPL18P10-201ENST00000425606 538 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 AC079780.1-201ENST00000428259 207 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 AC008065.1-201ENST00000428525 348 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 AC000111.2-201ENST00000448200 210 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 RNU7-107P-201ENST00000459121 61 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 Y_RNA.797-201ENST00000515977 94 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 SNORA31.19-201ENST00000517079 126 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 AC090281.1-201ENST00000523019 276 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 TOMM20P2-201ENST00000540082 421 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 AC006254.2-201ENST00000603259 279 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 MIR6853-201ENST00000619642 74 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 AC048347.1-201ENST00000624621 427 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 MIR4496-201ENST00000635896 61 ntBASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
FOXR1Q6PIV2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 Y_RNA.101-201ENST00000363154 102 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 RNU6-541P-201ENST00000384709 110 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 SNORA40C-201ENST00000391285 128 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 RNU6-1064P-201ENST00000410626 104 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 RN7SKP100-201ENST00000411258 284 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 RPL17P36-201ENST00000420302 549 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 RPS27AP12-201ENST00000429552 465 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 AC005154.2-201ENST00000438110 379 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 AURKAPS2-201ENST00000454983 333 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 Y_RNA.637-201ENST00000459424 114 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 snoU13.3-201ENST00000459441 104 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 RPS26P15-201ENST00000488067 348 ntBASIC4.72□□□□□ -1.65
FOXR1Q6PIV2 AC025445.1-201ENST00000502728 300 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms