Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 AC092436.3-201ENST00000511788 257 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 RNA5SP164-201ENST00000516533 110 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 RNU6-1332P-201ENST00000516666 104 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 AC103810.1-201ENST00000579873 453 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 AC023043.2-201ENST00000589678 1026 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 AL355073.2-201ENST00000612106 557 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 AC022149.2-201ENST00000621061 203 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 MIR3529-201ENST00000637713 78 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 HAUS6P2-201ENST00000433254 2404 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 AL049781.1-201ENST00000623195 3585 ntBASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.42□□□□□ -1.86
PPP4R4Q6NUP7 MTND5P30-201ENST00000452896 1731 ntBASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 RNU6-428P-201ENST00000362942 107 ntBASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 Y_RNA.184-201ENST00000363884 108 ntBASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 AL591419.1-201ENST00000427423 339 ntBASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 RPL23AP22-201ENST00000437556 453 ntBASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 USP9YP8-201ENST00000441913 500 ntBASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 UBBP3-201ENST00000445497 241 ntBASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 RPL23AP70-201ENST00000483361 460 ntBASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 AC046134.1-201ENST00000514454 666 ntBASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 RNU6-507P-201ENST00000516045 100 ntBASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 COX6CP5-201ENST00000527162 228 ntBASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 AL121917.1-203ENST00000605534 577 ntBASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 AL359854.1-201ENST00000614203 1594 ntBASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.41□□□□□ -1.86
PPP4R4Q6NUP7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.4□□□□□ -1.86
PPP4R4Q6NUP7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PPP4R4Q6NUP7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 RNU6-858P-201ENST00000362436 107 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 SNORD81.2-201ENST00000365153 76 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 RNU5E-7P-201ENST00000365290 117 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 RNU6-487P-201ENST00000365430 104 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 RNU6-1329P-201ENST00000365664 107 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 RNU6-510P-201ENST00000391239 108 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 AL590632.1-201ENST00000424289 371 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 AC104332.2-201ENST00000429959 156 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 FABP5P14-201ENST00000437273 393 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 RNU6-579P-201ENST00000516879 102 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 SNORA31.26-201ENST00000517250 137 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 AC243972.3-201ENST00000539655 198 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 AC100830.2-201ENST00000581636 240 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 BNIP3P22-201ENST00000593399 556 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 AC093913.1-201ENST00000614178 329 ntBASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.4□□□□□ -1.87
PPP4R4Q6NUP7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 RNU6-827P-201ENST00000365553 106 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 MIR200C-201ENST00000384980 68 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 FO393413.1-201ENST00000402892 195 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 AC093578.1-201ENST00000415219 368 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 AL365400.1-201ENST00000431854 640 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 AP001025.1-201ENST00000486139 332 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 AC008526.1-201ENST00000509149 338 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 RNU7-30P-201ENST00000516835 62 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 AC104576.1-201ENST00000524225 88 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 AC090616.3-201ENST00000582184 217 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 MIR4765-201ENST00000585007 77 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 UBE2V2P2-201ENST00000587677 504 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 MIR92B-201ENST00000607575 96 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 MIR7157-201ENST00000635801 60 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.39□□□□□ -1.87
PPP4R4Q6NUP7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PPP4R4Q6NUP7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 214.2 ms