Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
RC3H1Q5TC82 Y_RNA.182-201ENST00000363880 111 ntBASIC5.35□□□□□ -1.55
RC3H1Q5TC82 Y_RNA.331-201ENST00000365267 102 ntBASIC5.35□□□□□ -1.55
RC3H1Q5TC82 RNU6-213P-201ENST00000384051 104 ntBASIC5.35□□□□□ -1.55
RC3H1Q5TC82 IFNWP4-201ENST00000453148 294 ntBASIC5.35□□□□□ -1.55
RC3H1Q5TC82 PRSS3P4-201ENST00000453323 162 ntBASIC5.35□□□□□ -1.55
RC3H1Q5TC82 RPL23AP3-201ENST00000453844 468 ntBASIC5.35□□□□□ -1.55
RC3H1Q5TC82 AP000870.1-201ENST00000472927 406 ntBASIC5.35□□□□□ -1.55
RC3H1Q5TC82 RNU6-377P-201ENST00000515965 102 ntBASIC5.35□□□□□ -1.55
RC3H1Q5TC82 RNU6-1114P-201ENST00000516022 107 ntBASIC5.35□□□□□ -1.55
RC3H1Q5TC82 RN7SKP49-201ENST00000516675 260 ntBASIC5.35□□□□□ -1.55
RC3H1Q5TC82 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.35□□□□□ -1.55
RC3H1Q5TC82 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.35□□□□□ -1.55
RC3H1Q5TC82 MIR6500-201ENST00000622700 86 ntBASIC5.35□□□□□ -1.55
RC3H1Q5TC82 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
RC3H1Q5TC82 MAPK10-372ENST00000641954 3413 ntBASIC5.35□□□□□ -1.55
RC3H1Q5TC82 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 RNU5A-1-201ENST00000362698 116 ntBASIC5.34□□□□□ -1.55
RC3H1Q5TC82 RNA5SP119-201ENST00000362715 117 ntBASIC5.34□□□□□ -1.55
RC3H1Q5TC82 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 BTF3L4P2-201ENST00000392798 346 ntBASIC5.34□□□□□ -1.55
RC3H1Q5TC82 RAB9AP3-201ENST00000412737 573 ntBASIC5.34□□□□□ -1.55
RC3H1Q5TC82 CYCSP10-201ENST00000417973 294 ntBASIC5.34□□□□□ -1.55
RC3H1Q5TC82 AC011742.1-201ENST00000431448 434 ntBASIC5.34□□□□□ -1.55
RC3H1Q5TC82 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 RPL23AP46-201ENST00000438548 490 ntBASIC5.34□□□□□ -1.55
RC3H1Q5TC82 RAB9AP1-201ENST00000449393 573 ntBASIC5.34□□□□□ -1.55
RC3H1Q5TC82 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 AC084851.1-201ENST00000529105 249 ntBASIC5.34□□□□□ -1.55
RC3H1Q5TC82 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 AL354798.1-201ENST00000622505 329 ntBASIC5.34□□□□□ -1.55
RC3H1Q5TC82 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RC3H1Q5TC82 AP000542.2-201ENST00000623199 6179 ntBASIC5.34□□□□□ -1.55
RC3H1Q5TC82 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
RC3H1Q5TC82 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
RC3H1Q5TC82 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
RC3H1Q5TC82 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 SNORA63.1-201ENST00000362493 131 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 RNA5SP124-201ENST00000362739 110 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 RNA5SP197-201ENST00000363357 119 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 SNORD115-32-201ENST00000364079 82 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 SNORA73.2-201ENST00000364946 201 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 Y_RNA.333-201ENST00000365274 102 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 RNY4P18-201ENST00000391107 89 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 UBA52P6-201ENST00000399822 382 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 RPS26P2-201ENST00000440331 348 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 SNORA25.12-201ENST00000516202 82 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 CYCSP26-201ENST00000534107 320 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 AC069200.1-201ENST00000609511 323 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 AL121772.2-201ENST00000614331 297 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 Y_RNA.802-201ENST00000614892 130 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 Z82217.1-201ENST00000625157 8149 ntBASIC5.33□□□□□ -1.56
RC3H1Q5TC82 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RC3H1Q5TC82 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
RC3H1Q5TC82 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.32□□□□□ -1.56
RC3H1Q5TC82 AL592437.2-201ENST00000421655 2434 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.32□□□□□ -1.56
RC3H1Q5TC82 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RC3H1Q5TC82 RNU6-263P-201ENST00000363811 107 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 RNU6-961P-201ENST00000363893 105 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 RNA5SP267-201ENST00000364893 126 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 RNU6-741P-201ENST00000383889 107 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 SNORA36C-201ENST00000384289 132 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
RC3H1Q5TC82 AL513331.1-201ENST00000411908 397 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC5.32□□□□□ -1.56
RC3H1Q5TC82 AL627311.1-201ENST00000431514 115 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.32□□□□□ -1.56
RC3H1Q5TC82 AC096638.1-201ENST00000444678 216 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.32□□□□□ -1.56
RC3H1Q5TC82 AC022655.2-201ENST00000577280 318 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 MIR4716-201ENST00000579628 84 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 RN7SL435P-201ENST00000584418 282 ntBASIC5.32□□□□□ -1.56
RC3H1Q5TC82 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms