Protein–RNA interactions for Protein: Q53GS9

USP39, U4/U6.U5 tri-snRNP-associated protein 2, humanhuman

Known RBP Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP39Q53GS9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
USP39Q53GS9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.78□□□□□ -1.8
USP39Q53GS9 AC090517.1-201ENST00000569307 266 ntBASIC3.78□□□□□ -1.8
USP39Q53GS9 AC020914.4-201ENST00000597690 277 ntBASIC3.78□□□□□ -1.8
USP39Q53GS9 AL138825.1-201ENST00000618587 192 ntBASIC3.78□□□□□ -1.8
USP39Q53GS9 MIR6130-201ENST00000619419 109 ntBASIC3.78□□□□□ -1.8
USP39Q53GS9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP39Q53GS9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP39Q53GS9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
USP39Q53GS9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.77□□□□□ -1.81
USP39Q53GS9 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP39Q53GS9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP39Q53GS9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.77□□□□□ -1.81
USP39Q53GS9 Y_RNA.48-201ENST00000362710 103 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 RNU6-200P-201ENST00000364743 107 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 MIR135A2-201ENST00000384854 100 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 NDUFB4P4-201ENST00000404822 243 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 AC099677.1-201ENST00000420575 175 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 VDAC1P3-201ENST00000434069 851 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.77□□□□□ -1.81
USP39Q53GS9 SETP5-201ENST00000437270 562 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 RPL21P41-201ENST00000459863 264 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.77□□□□□ -1.81
USP39Q53GS9 RNU6-111P-201ENST00000517179 105 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.77□□□□□ -1.81
USP39Q53GS9 AC104576.1-201ENST00000524225 88 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 CBX3P8-201ENST00000532412 525 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.77□□□□□ -1.81
USP39Q53GS9 RRN3P3-201ENST00000549207 578 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.77□□□□□ -1.81
USP39Q53GS9 RNU1-30P-201ENST00000606575 163 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 SDR42E1P2-201ENST00000614861 481 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.77□□□□□ -1.81
USP39Q53GS9 SDR42E1P4-201ENST00000620894 481 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 AL512643.1-201ENST00000635735 524 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 U6.98-201ENST00000637157 84 ntBASIC3.77□□□□□ -1.81
USP39Q53GS9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.77□□□□□ -1.81
USP39Q53GS9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP39Q53GS9 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP39Q53GS9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.77□□□□□ -1.81
USP39Q53GS9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP39Q53GS9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP39Q53GS9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
USP39Q53GS9 FAM35DP-201ENST00000323387 2712 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP39Q53GS9 RNU6-770P-201ENST00000363929 105 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 RNA5SP267-201ENST00000364893 126 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 Y_RNA.480-201ENST00000384364 102 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 SNORD73A-201ENST00000386062 65 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 RNU6-821P-201ENST00000390995 107 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 HMGN2P8-201ENST00000391458 268 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 AL159169.1-201ENST00000421119 127 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 MTND5P15-201ENST00000434246 349 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 SNORA71B-202ENST00000439232 272 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.76□□□□□ -1.81
USP39Q53GS9 MTCO3P8-201ENST00000453691 755 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 AC234775.1-201ENST00000454247 670 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 SNORA31.3-201ENST00000516029 96 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 RNU6-677P-201ENST00000516914 101 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.76□□□□□ -1.81
USP39Q53GS9 AC103783.1-201ENST00000520506 373 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.76□□□□□ -1.81
USP39Q53GS9 AP004371.1-201ENST00000525240 214 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 AP003385.6-201ENST00000531603 374 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.76□□□□□ -1.81
USP39Q53GS9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.76□□□□□ -1.81
USP39Q53GS9 AC012433.1-201ENST00000588916 398 ntBASIC3.76□□□□□ -1.81
USP39Q53GS9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP39Q53GS9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP39Q53GS9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP39Q53GS9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP39Q53GS9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP39Q53GS9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP39Q53GS9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP39Q53GS9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP39Q53GS9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP39Q53GS9 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 NCAPGP1-201ENST00000505112 1814 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP39Q53GS9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USP39Q53GS9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP39Q53GS9 Y_RNA.19-201ENST00000362462 99 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 RNA5SP295-201ENST00000362655 121 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 Y_RNA.105-201ENST00000363182 111 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 RNU6-1181P-201ENST00000384191 106 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 Y_RNA.785-201ENST00000384290 109 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 Y_RNA.555-201ENST00000384673 110 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 RNU6-837P-201ENST00000391056 108 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.75□□□□□ -1.81
USP39Q53GS9 BX842559.1-201ENST00000419615 532 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.75□□□□□ -1.81
USP39Q53GS9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.75□□□□□ -1.81
USP39Q53GS9 CYCSP32-201ENST00000440548 321 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.75□□□□□ -1.81
USP39Q53GS9 PCMTD1P1-201ENST00000455560 355 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 HMGN2P16-201ENST00000456802 261 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.75□□□□□ -1.81
USP39Q53GS9 RN7SL601P-201ENST00000471221 293 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 RPL31P60-201ENST00000478450 367 ntBASIC3.75□□□□□ -1.81
USP39Q53GS9 AC018437.1-201ENST00000492214 406 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms