Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 RNU6-1085P-201ENST00000363576 107 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 RNY4P14-201ENST00000363656 96 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 RNU6-1322P-201ENST00000364309 107 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 RNU4-48P-201ENST00000365559 182 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 Y_RNA.409-201ENST00000383990 98 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 Y_RNA.450-201ENST00000384198 113 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 Y_RNA.481-201ENST00000384373 102 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 MIR524-201ENST00000385242 87 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 RNA5SP171-201ENST00000391071 115 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 NDUFB4P4-201ENST00000404822 243 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 AL590002.1-201ENST00000406554 418 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 AL513331.1-201ENST00000411908 397 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 OR51A5P-201ENST00000415429 942 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.16□□□□□ -2.06
CKAP4Q07065 MYL8P-204ENST00000431574 518 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 DDX3P2-201ENST00000446138 111 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.16□□□□□ -2.06
CKAP4Q07065 FDX1P2-201ENST00000450769 375 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 AL356010.1-201ENST00000456364 102 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 AL672167.3-201ENST00000465951 960 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 AL121769.1-201ENST00000469473 401 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 AC107626.1-201ENST00000471084 183 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.16□□□□□ -2.06
CKAP4Q07065 AC116562.3-201ENST00000506136 177 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 AC117522.1-201ENST00000509821 380 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.16□□□□□ -2.06
CKAP4Q07065 RNU6-927P-201ENST00000516199 100 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 RNU6-390P-201ENST00000516259 103 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
CKAP4Q07065 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.16□□□□□ -2.06
CKAP4Q07065 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.16□□□□□ -2.06
CKAP4Q07065 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.16□□□□□ -2.06
CKAP4Q07065 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.16□□□□□ -2.06
CKAP4Q07065 AC068587.5-201ENST00000528506 175 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.16□□□□□ -2.06
CKAP4Q07065 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.16□□□□□ -2.06
CKAP4Q07065 AC174048.1-201ENST00000603389 144 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 Z84480.1-201ENST00000605131 311 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CKAP4Q07065 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CKAP4Q07065 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CKAP4Q07065 OR4G2P-202ENST00000641004 1759 ntBASIC2.15□□□□□ -2.06
CKAP4Q07065 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
CKAP4Q07065 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CKAP4Q07065 AC022336.2-201ENST00000568966 2538 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 RNU6-61P-201ENST00000365528 109 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CKAP4Q07065 RNU6-946P-201ENST00000383878 107 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 RNU6-701P-201ENST00000384059 107 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 SNORA24.1-201ENST00000384401 135 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 RNU6-1158P-201ENST00000391167 107 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AC068050.1-201ENST00000394891 380 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AL139397.2-201ENST00000404529 772 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AC114491.1-201ENST00000416095 246 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AC093106.2-201ENST00000428212 385 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AC000111.3-201ENST00000433478 193 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.15□□□□□ -2.07
CKAP4Q07065 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.15□□□□□ -2.07
CKAP4Q07065 AL109933.2-201ENST00000452651 260 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AL139109.1-201ENST00000455491 297 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 MRPS17P3-201ENST00000465453 385 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AC083798.1-201ENST00000472671 131 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
CKAP4Q07065 AL049874.1-201ENST00000489560 388 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AC097462.2-201ENST00000504623 481 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.15□□□□□ -2.07
CKAP4Q07065 SNORA40.12-201ENST00000516329 111 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 OR5B19P-201ENST00000531766 928 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AL512360.1-201ENST00000555346 234 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AC027176.1-201ENST00000560204 514 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AC023824.2-201ENST00000566185 400 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AC025678.1-201ENST00000567861 338 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AC009127.3-201ENST00000570531 403 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 MIR1254-2-201ENST00000579553 63 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.15□□□□□ -2.07
CKAP4Q07065 MIR4775-201ENST00000581168 75 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 RPS15AP11-201ENST00000594193 385 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AP001596.2-201ENST00000608410 312 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 MIR6840-201ENST00000611937 71 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AL365204.3-201ENST00000612448 685 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.15□□□□□ -2.07
CKAP4Q07065 AC007998.5-201ENST00000622938 237 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 MIR3688-2-201ENST00000636963 87 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 MIR1321-201ENST00000637766 79 ntBASIC2.15□□□□□ -2.07
CKAP4Q07065 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.15□□□□□ -2.07
CKAP4Q07065 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
CKAP4Q07065 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CKAP4Q07065 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.07
CKAP4Q07065 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CKAP4Q07065 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CKAP4Q07065 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CKAP4Q07065 RNU6-7-201ENST00000364784 107 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 RNU4-12P-201ENST00000365233 139 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 RNU6-8-201ENST00000365467 107 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 RNU6-641P-201ENST00000384006 107 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 RNU6-483P-201ENST00000384088 108 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 RNU6-817P-201ENST00000391083 104 ntBASIC2.14□□□□□ -2.07
CKAP4Q07065 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CKAP4Q07065 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms