Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.15□□□□□ -1.75
PMS1P54277 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.15□□□□□ -1.75
PMS1P54277 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.15□□□□□ -1.75
PMS1P54277 RPL30P10-201ENST00000488148 337 ntBASIC4.15□□□□□ -1.75
PMS1P54277 RNY3P15-201ENST00000516297 97 ntBASIC4.15□□□□□ -1.75
PMS1P54277 RNA5SP468-201ENST00000516782 93 ntBASIC4.15□□□□□ -1.75
PMS1P54277 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.15□□□□□ -1.75
PMS1P54277 MIR3690-201ENST00000580266 75 ntBASIC4.15□□□□□ -1.75
PMS1P54277 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.15□□□□□ -1.75
PMS1P54277 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.15□□□□□ -1.75
PMS1P54277 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.15□□□□□ -1.75
PMS1P54277 AC025946.2-201ENST00000603398 234 ntBASIC4.15□□□□□ -1.75
PMS1P54277 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.15□□□□□ -1.75
PMS1P54277 AC062037.2-201ENST00000610137 73 ntBASIC4.15□□□□□ -1.75
PMS1P54277 AC048347.1-201ENST00000624621 427 ntBASIC4.15□□□□□ -1.75
PMS1P54277 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.15□□□□□ -1.75
PMS1P54277 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PMS1P54277 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PMS1P54277 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PMS1P54277 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
PMS1P54277 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PMS1P54277 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
PMS1P54277 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PMS1P54277 RNA5SP97-201ENST00000365006 84 ntBASIC4.14□□□□□ -1.75
PMS1P54277 SNORA62-201ENST00000365493 153 ntBASIC4.14□□□□□ -1.75
PMS1P54277 RNU6-658P-201ENST00000384606 106 ntBASIC4.14□□□□□ -1.75
PMS1P54277 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.14□□□□□ -1.75
PMS1P54277 RPL21P1-201ENST00000399532 476 ntBASIC4.14□□□□□ -1.75
PMS1P54277 RNA5SP494-201ENST00000410653 129 ntBASIC4.14□□□□□ -1.75
PMS1P54277 RNU6-847P-201ENST00000411115 108 ntBASIC4.14□□□□□ -1.75
PMS1P54277 Y_RNA.625-201ENST00000411256 107 ntBASIC4.14□□□□□ -1.75
PMS1P54277 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PMS1P54277 AC124916.1-201ENST00000444020 547 ntBASIC4.14□□□□□ -1.75
PMS1P54277 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.14□□□□□ -1.75
PMS1P54277 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.14□□□□□ -1.75
PMS1P54277 HMGN2P7-201ENST00000456186 273 ntBASIC4.14□□□□□ -1.75
PMS1P54277 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.14□□□□□ -1.75
PMS1P54277 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.14□□□□□ -1.75
PMS1P54277 RNU6-1282P-201ENST00000516735 96 ntBASIC4.14□□□□□ -1.75
PMS1P54277 SNORA40.15-201ENST00000516884 107 ntBASIC4.14□□□□□ -1.75
PMS1P54277 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.14□□□□□ -1.75
PMS1P54277 IGHV3-76-201ENST00000522465 295 ntBASIC4.14□□□□□ -1.75
PMS1P54277 AL590705.4-201ENST00000532209 134 ntBASIC4.14□□□□□ -1.75
PMS1P54277 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.14□□□□□ -1.75
PMS1P54277 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.14□□□□□ -1.75
PMS1P54277 AL390123.1-201ENST00000603216 237 ntBASIC4.14□□□□□ -1.75
PMS1P54277 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PMS1P54277 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
PMS1P54277 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PMS1P54277 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PMS1P54277 AL353746.1-201ENST00000566293 6881 ntBASIC4.14□□□□□ -1.75
PMS1P54277 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PMS1P54277 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PMS1P54277 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PMS1P54277 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PMS1P54277 Y_RNA.123-201ENST00000363338 102 ntBASIC4.13□□□□□ -1.75
PMS1P54277 Y_RNA.276-201ENST00000364732 109 ntBASIC4.13□□□□□ -1.75
PMS1P54277 Y_RNA.396-201ENST00000383949 103 ntBASIC4.13□□□□□ -1.75
PMS1P54277 RPS29P13-201ENST00000402041 169 ntBASIC4.13□□□□□ -1.75
PMS1P54277 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.13□□□□□ -1.75
PMS1P54277 AC079354.2-201ENST00000453523 154 ntBASIC4.13□□□□□ -1.75
PMS1P54277 AC006026.2-201ENST00000457376 180 ntBASIC4.13□□□□□ -1.75
PMS1P54277 RN7SKP210-201ENST00000459176 261 ntBASIC4.13□□□□□ -1.75
PMS1P54277 RPS29P27-201ENST00000463711 170 ntBASIC4.13□□□□□ -1.75
PMS1P54277 RPL21P104-201ENST00000464143 478 ntBASIC4.13□□□□□ -1.75
PMS1P54277 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.13□□□□□ -1.75
PMS1P54277 RN7SKP83-201ENST00000516512 178 ntBASIC4.13□□□□□ -1.75
PMS1P54277 RNU6-911P-201ENST00000516523 104 ntBASIC4.13□□□□□ -1.75
PMS1P54277 MIR2114-201ENST00000516645 80 ntBASIC4.13□□□□□ -1.75
PMS1P54277 RN7SKP209-201ENST00000516888 304 ntBASIC4.13□□□□□ -1.75
PMS1P54277 RNU6-703P-201ENST00000516946 107 ntBASIC4.13□□□□□ -1.75
PMS1P54277 RNU6-1183P-201ENST00000517054 60 ntBASIC4.13□□□□□ -1.75
PMS1P54277 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.13□□□□□ -1.75
PMS1P54277 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.13□□□□□ -1.75
PMS1P54277 AC008011.1-201ENST00000545989 227 ntBASIC4.13□□□□□ -1.75
PMS1P54277 CYCSP39-201ENST00000565821 309 ntBASIC4.13□□□□□ -1.75
PMS1P54277 RN7SL703P-201ENST00000578485 302 ntBASIC4.13□□□□□ -1.75
PMS1P54277 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.13□□□□□ -1.75
PMS1P54277 AL606490.9-201ENST00000603331 271 ntBASIC4.13□□□□□ -1.75
PMS1P54277 AC008962.1-201ENST00000605729 304 ntBASIC4.13□□□□□ -1.75
PMS1P54277 FTX_3.1-201ENST00000610451 147 ntBASIC4.13□□□□□ -1.75
PMS1P54277 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PMS1P54277 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PMS1P54277 AF127577.6-201ENST00000623352 2191 ntBASIC4.13□□□□□ -1.75
PMS1P54277 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PMS1P54277 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PMS1P54277 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PMS1P54277 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PMS1P54277 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
PMS1P54277 MAPK10-372ENST00000641954 3413 ntBASIC4.12□□□□□ -1.75
PMS1P54277 Y_RNA.288-201ENST00000364854 92 ntBASIC4.12□□□□□ -1.75
PMS1P54277 Y_RNA.307-201ENST00000365022 117 ntBASIC4.12□□□□□ -1.75
PMS1P54277 DEFB109C-201ENST00000382575 264 ntBASIC4.12□□□□□ -1.75
PMS1P54277 DEFB109B-201ENST00000382656 264 ntBASIC4.12□□□□□ -1.75
PMS1P54277 RNU6-217P-201ENST00000384164 104 ntBASIC4.12□□□□□ -1.75
PMS1P54277 RNU6-784P-201ENST00000384330 106 ntBASIC4.12□□□□□ -1.75
PMS1P54277 U3.37-201ENST00000408528 213 ntBASIC4.12□□□□□ -1.75
PMS1P54277 Y_RNA.592-201ENST00000410274 109 ntBASIC4.12□□□□□ -1.75
PMS1P54277 RNA5SP31-201ENST00000411144 127 ntBASIC4.12□□□□□ -1.75
PMS1P54277 CRYBB2P1-203ENST00000415709 538 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 154.8 ms