Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RAC1P2-201ENST00000511164 579 ntBASIC3.49□□□□□ -1.85
CLK3P49761 RNU6-1023P-201ENST00000516137 106 ntBASIC3.49□□□□□ -1.85
CLK3P49761 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.49□□□□□ -1.85
CLK3P49761 AC040926.1-201ENST00000530195 238 ntBASIC3.49□□□□□ -1.85
CLK3P49761 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.49□□□□□ -1.85
CLK3P49761 AC008011.1-201ENST00000545989 227 ntBASIC3.49□□□□□ -1.85
CLK3P49761 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.49□□□□□ -1.85
CLK3P49761 MIR5188-201ENST00000583467 113 ntBASIC3.49□□□□□ -1.85
CLK3P49761 AC093227.2-201ENST00000589357 285 ntBASIC3.49□□□□□ -1.85
CLK3P49761 MTND4LP5-201ENST00000605152 292 ntBASIC3.49□□□□□ -1.85
CLK3P49761 AC007619.2-201ENST00000605743 379 ntBASIC3.49□□□□□ -1.85
CLK3P49761 AC002044.1-201ENST00000606707 158 ntBASIC3.49□□□□□ -1.85
CLK3P49761 U6.104-201ENST00000637979 90 ntBASIC3.49□□□□□ -1.85
CLK3P49761 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.49□□□□□ -1.85
CLK3P49761 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLK3P49761 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.49□□□□□ -1.85
CLK3P49761 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.49□□□□□ -1.85
CLK3P49761 AC091152.2-201ENST00000591628 2569 ntBASIC3.49□□□□□ -1.85
CLK3P49761 AC010733.2-201ENST00000589496 5702 ntBASIC3.49□□□□□ -1.85
CLK3P49761 OR4G2P-202ENST00000641004 1759 ntBASIC3.48□□□□□ -1.85
CLK3P49761 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.48□□□□□ -1.85
CLK3P49761 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLK3P49761 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLK3P49761 AC138393.1-203ENST00000327086 343 ntBASIC3.48□□□□□ -1.85
CLK3P49761 OR56A5-201ENST00000340110 738 ntBASIC3.48□□□□□ -1.85
CLK3P49761 Y_RNA.151-201ENST00000363566 112 ntBASIC3.48□□□□□ -1.85
CLK3P49761 RNU1-64P-201ENST00000365443 163 ntBASIC3.48□□□□□ -1.85
CLK3P49761 Y_RNA.515-201ENST00000384535 112 ntBASIC3.48□□□□□ -1.85
CLK3P49761 RNU6-14P-201ENST00000384630 106 ntBASIC3.48□□□□□ -1.85
CLK3P49761 MT-TW-201ENST00000387382 68 ntBASIC3.48□□□□□ -1.85
CLK3P49761 RNA5SP424-201ENST00000390988 115 ntBASIC3.48□□□□□ -1.85
CLK3P49761 AL138885.1-201ENST00000405921 675 ntBASIC3.48□□□□□ -1.85
CLK3P49761 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.48□□□□□ -1.85
CLK3P49761 AL591419.1-201ENST00000427423 339 ntBASIC3.48□□□□□ -1.85
CLK3P49761 AL158071.1-201ENST00000430315 461 ntBASIC3.48□□□□□ -1.85
CLK3P49761 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.48□□□□□ -1.85
CLK3P49761 SNORA71B-202ENST00000439232 272 ntBASIC3.48□□□□□ -1.85
CLK3P49761 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.48□□□□□ -1.85
CLK3P49761 RNU6-953P-201ENST00000459154 107 ntBASIC3.48□□□□□ -1.85
CLK3P49761 AC105758.1-201ENST00000506038 399 ntBASIC3.48□□□□□ -1.85
CLK3P49761 AC069113.1-201ENST00000517763 267 ntBASIC3.48□□□□□ -1.85
CLK3P49761 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLK3P49761 HSPE1P5-201ENST00000561489 272 ntBASIC3.48□□□□□ -1.85
CLK3P49761 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.48□□□□□ -1.85
CLK3P49761 MIR4425-201ENST00000580572 84 ntBASIC3.48□□□□□ -1.85
CLK3P49761 MIR3128-201ENST00000581957 66 ntBASIC3.48□□□□□ -1.85
CLK3P49761 KLKP1-201ENST00000595979 403 ntBASIC3.48□□□□□ -1.85
CLK3P49761 ELOCP5-201ENST00000604924 333 ntBASIC3.48□□□□□ -1.85
CLK3P49761 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.48□□□□□ -1.85
CLK3P49761 FP236240.3-201ENST00000623061 327 ntBASIC3.48□□□□□ -1.85
CLK3P49761 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.48□□□□□ -1.85
CLK3P49761 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLK3P49761 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.48□□□□□ -1.85
CLK3P49761 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLK3P49761 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.47□□□□□ -1.85
CLK3P49761 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.47□□□□□ -1.85
CLK3P49761 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLK3P49761 Y_RNA.14-201ENST00000362415 103 ntBASIC3.47□□□□□ -1.85
CLK3P49761 Y_RNA.117-201ENST00000363294 101 ntBASIC3.47□□□□□ -1.85
CLK3P49761 Y_RNA.214-201ENST00000364201 112 ntBASIC3.47□□□□□ -1.85
CLK3P49761 Y_RNA.222-201ENST00000364264 102 ntBASIC3.47□□□□□ -1.85
CLK3P49761 RNU6-371P-201ENST00000364283 108 ntBASIC3.47□□□□□ -1.85
CLK3P49761 RNU4-42P-201ENST00000364738 142 ntBASIC3.47□□□□□ -1.85
CLK3P49761 Y_RNA.551-201ENST00000384661 102 ntBASIC3.47□□□□□ -1.85
CLK3P49761 Y_RNA.562-201ENST00000384695 113 ntBASIC3.47□□□□□ -1.85
CLK3P49761 RNU6-817P-201ENST00000391083 104 ntBASIC3.47□□□□□ -1.85
CLK3P49761 RN7SKP156-201ENST00000410308 342 ntBASIC3.47□□□□□ -1.85
CLK3P49761 RNU6-174P-201ENST00000410406 106 ntBASIC3.47□□□□□ -1.85
CLK3P49761 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.47□□□□□ -1.85
CLK3P49761 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.47□□□□□ -1.85
CLK3P49761 BX276092.3-201ENST00000424182 230 ntBASIC3.47□□□□□ -1.85
CLK3P49761 AL133396.1-201ENST00000432048 687 ntBASIC3.47□□□□□ -1.85
CLK3P49761 NDUFB1P1-201ENST00000435191 180 ntBASIC3.47□□□□□ -1.85
CLK3P49761 CHEK2P4-201ENST00000450340 246 ntBASIC3.47□□□□□ -1.85
CLK3P49761 PCMTD1P1-201ENST00000455560 355 ntBASIC3.47□□□□□ -1.85
CLK3P49761 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.47□□□□□ -1.85
CLK3P49761 HMGN1P11-201ENST00000508668 303 ntBASIC3.47□□□□□ -1.85
CLK3P49761 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.47□□□□□ -1.85
CLK3P49761 SCARNA15.2-201ENST00000516409 127 ntBASIC3.47□□□□□ -1.85
CLK3P49761 NDUFB9P3-201ENST00000521269 501 ntBASIC3.47□□□□□ -1.85
CLK3P49761 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.47□□□□□ -1.85
CLK3P49761 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.47□□□□□ -1.85
CLK3P49761 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.47□□□□□ -1.85
CLK3P49761 SYF2P1-201ENST00000550658 413 ntBASIC3.47□□□□□ -1.85
CLK3P49761 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
CLK3P49761 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.47□□□□□ -1.85
CLK3P49761 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLK3P49761 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLK3P49761 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.47□□□□□ -1.85
CLK3P49761 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLK3P49761 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CLK3P49761 AC008568.2-201ENST00000623862 2313 ntBASIC3.47□□□□□ -1.85
CLK3P49761 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLK3P49761 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
CLK3P49761 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
CLK3P49761 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLK3P49761 Y_RNA.60-201ENST00000362831 98 ntBASIC3.46□□□□□ -1.86
CLK3P49761 SNORA20.1-201ENST00000364790 130 ntBASIC3.46□□□□□ -1.86
CLK3P49761 Y_RNA.376-201ENST00000365638 108 ntBASIC3.46□□□□□ -1.86
CLK3P49761 Y_RNA.483-201ENST00000384380 101 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms