Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.83□□□□□ -1.96
HOXD13P35453 Y_RNA.159-201ENST00000363674 87 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 RNU6-517P-201ENST00000384362 110 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 RNU6-434P-201ENST00000384376 107 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 RNU6-393P-201ENST00000384475 107 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 Y_RNA.559-201ENST00000384686 107 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 RPS4XP8-201ENST00000402039 771 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 CIR1P3-201ENST00000405137 479 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 RNU2-16P-201ENST00000410712 136 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXD13P35453 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.83□□□□□ -1.96
HOXD13P35453 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXD13P35453 AL122001.1-201ENST00000457027 370 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 AL049873.1-201ENST00000480540 376 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 AC018437.1-201ENST00000492214 406 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 MTND3P25-201ENST00000509243 135 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXD13P35453 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXD13P35453 AC009063.1-201ENST00000563342 702 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXD13P35453 MIR3941-201ENST00000582572 103 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.83□□□□□ -1.96
HOXD13P35453 Z99129.1-201ENST00000612510 255 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.83□□□□□ -1.96
HOXD13P35453 AC244517.12-201ENST00000623581 663 ntBASIC2.83□□□□□ -1.96
HOXD13P35453 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.83□□□□□ -1.96
HOXD13P35453 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXD13P35453 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.82□□□□□ -1.96
HOXD13P35453 RNU6-859P-201ENST00000362728 107 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 Y_RNA.194-201ENST00000363985 102 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 RNU6-384P-201ENST00000364900 104 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 RNU1-109P-201ENST00000383960 147 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 RNU6-259P-201ENST00000383999 107 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
HOXD13P35453 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
HOXD13P35453 RPL19P1-201ENST00000411635 428 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 HMGN2P35-201ENST00000412164 270 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXD13P35453 AC138623.1-201ENST00000418060 216 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 NUP35P1-201ENST00000422734 947 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXD13P35453 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXD13P35453 AC092436.1-201ENST00000506450 503 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXD13P35453 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXD13P35453 RNU1-86P-201ENST00000516108 154 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 Y_RNA.687-201ENST00000516558 91 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 RNU1-107P-201ENST00000516617 154 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 CKS1BP7-201ENST00000522230 235 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 ELOCP31-201ENST00000540463 467 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 AC079598.5-201ENST00000547460 117 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXD13P35453 CR383656.8-201ENST00000549046 145 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 LRRC37A5P-203ENST00000580181 585 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.82□□□□□ -1.96
HOXD13P35453 AC073539.2-201ENST00000597113 165 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 AC078795.2-201ENST00000602835 1252 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.82□□□□□ -1.96
HOXD13P35453 AC010378.1-201ENST00000619270 362 ntBASIC2.82□□□□□ -1.96
HOXD13P35453 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
HOXD13P35453 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
HOXD13P35453 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.81□□□□□ -1.96
HOXD13P35453 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
HOXD13P35453 OR56A5-201ENST00000340110 738 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 SNORD114-19-201ENST00000363072 75 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 OR5H15-201ENST00000383696 930 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 Y_RNA.480-201ENST00000384364 102 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 Y_RNA.481-201ENST00000384373 102 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 AC063976.3-201ENST00000426849 329 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 MTCO2P19-201ENST00000427513 598 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 ARL5AP4-201ENST00000430731 512 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.81□□□□□ -1.96
HOXD13P35453 CALM1P1-201ENST00000442082 433 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXD13P35453 AL118520.1-201ENST00000450770 291 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 AC027673.1-201ENST00000456245 405 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 RPS27AP9-201ENST00000477681 438 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXD13P35453 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXD13P35453 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
HOXD13P35453 AC010186.2-204ENST00000537668 439 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 AC023824.2-201ENST00000566185 400 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 AC105245.1-201ENST00000581934 244 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 AL391646.1-201ENST00000603860 190 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 Z82243.1-201ENST00000609432 473 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 AL031601.2-202ENST00000622650 282 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.81□□□□□ -1.96
HOXD13P35453 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.81□□□□□ -1.96
HOXD13P35453 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.81□□□□□ -1.96
HOXD13P35453 MTND5P26-201ENST00000426018 1752 ntBASIC2.81□□□□□ -1.96
HOXD13P35453 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
HOXD13P35453 AL139276.1-201ENST00000311910 1001 ntBASIC2.8□□□□□ -1.96
HOXD13P35453 SNORD62.1-201ENST00000362541 86 ntBASIC2.8□□□□□ -1.96
HOXD13P35453 SNORA38-201ENST00000363946 132 ntBASIC2.8□□□□□ -1.96
HOXD13P35453 RNU4-24P-201ENST00000364565 139 ntBASIC2.8□□□□□ -1.96
HOXD13P35453 RNU6-7-201ENST00000364784 107 ntBASIC2.8□□□□□ -1.96
HOXD13P35453 RNU6-487P-201ENST00000365430 104 ntBASIC2.8□□□□□ -1.96
HOXD13P35453 RNU6-996P-201ENST00000365438 107 ntBASIC2.8□□□□□ -1.96
HOXD13P35453 RNU6-8-201ENST00000365467 107 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms