Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXC6P09630 FRG2DP-202ENST00000566967 323 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 MIR3672-201ENST00000584290 82 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 AC104763.2-201ENST00000604179 382 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 AC004832.5-201ENST00000608677 401 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 AC006023.2-201ENST00000609916 167 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 AC090115.4-201ENST00000609970 188 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 MIR6817-201ENST00000615588 66 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOXC6P09630 AC092435.3-201ENST00000565538 3654 ntBASIC3.16□□□□□ -1.9
HOXC6P09630 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
HOXC6P09630 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
HOXC6P09630 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
HOXC6P09630 AC009812.4-201ENST00000569134 1805 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 MIR26A1-201ENST00000362205 77 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 Y_RNA.384-201ENST00000383909 102 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 Y_RNA.387-201ENST00000383918 102 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 RNU6-1227P-201ENST00000383981 107 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 SNORA36C-201ENST00000384289 132 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 SNORA16.2-201ENST00000390991 127 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 AL139397.2-201ENST00000404529 772 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 RN7SKP140-201ENST00000411196 284 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 RNU6-387P-201ENST00000411331 105 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 ARL5AP1-201ENST00000418991 388 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.15□□□□□ -1.91
HOXC6P09630 AC005534.2-201ENST00000431047 433 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXC6P09630 VDAC1P3-201ENST00000434069 851 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 RPS3AP52-201ENST00000435639 297 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 HMGB1P12-201ENST00000438594 598 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 AL513043.1-201ENST00000439124 535 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXC6P09630 RPS27P29-201ENST00000463110 252 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 RPL21P104-201ENST00000464143 478 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 AC010285.1-201ENST00000470580 392 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 HMGN1P10-201ENST00000474557 553 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 TRBV12-1-201ENST00000479785 344 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 AC009901.1-201ENST00000506703 541 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 KLHL2P1-201ENST00000508691 521 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 RNU6-1073P-201ENST00000517182 106 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.15□□□□□ -1.91
HOXC6P09630 FAM60BP-201ENST00000578364 658 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 AL138889.2-201ENST00000603883 242 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 AL365204.3-201ENST00000612448 685 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HOXC6P09630 AC093831.2-201ENST00000624393 3427 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 AC103710.2-202ENST00000641454 2853 ntBASIC3.15□□□□□ -1.91
HOXC6P09630 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOXC6P09630 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
HOXC6P09630 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC6P09630 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXC6P09630 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HOXC6P09630 RNU6-254P-201ENST00000363377 107 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 Y_RNA.259-201ENST00000364619 101 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 RNU6-715P-201ENST00000365204 103 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 Y_RNA.339-201ENST00000365325 102 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC6P09630 Y_RNA.579-201ENST00000390939 94 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 MIR548F5-201ENST00000408421 86 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 RNU2-71P-201ENST00000411395 189 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 RPL21P66-201ENST00000426566 466 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC6P09630 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXC6P09630 AC104058.1-201ENST00000448028 297 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 DYNLL1P5-201ENST00000467158 270 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.14□□□□□ -1.91
HOXC6P09630 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.14□□□□□ -1.91
HOXC6P09630 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.14□□□□□ -1.91
HOXC6P09630 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.14□□□□□ -1.91
HOXC6P09630 AC093331.1-201ENST00000521474 169 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 AP003072.1-201ENST00000531740 145 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 AL121821.2-201ENST00000556081 394 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 AC022432.1-201ENST00000595739 310 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXC6P09630 APOOP1-201ENST00000604695 592 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 AL627309.6-201ENST00000606857 840 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.14□□□□□ -1.91
HOXC6P09630 AC009570.1-201ENST00000609599 745 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 AC092608.2-201ENST00000624427 218 ntBASIC3.14□□□□□ -1.91
HOXC6P09630 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
HOXC6P09630 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC6P09630 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC6P09630 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXC6P09630 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC6P09630 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HOXC6P09630 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.13□□□□□ -1.91
HOXC6P09630 AC121333.1-201ENST00000567488 2709 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 RNU6-82P-201ENST00000363970 107 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 SNORA70B-201ENST00000384210 135 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 RNU6-393P-201ENST00000384475 107 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 MIR512-1-201ENST00000384913 84 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 RPS4XP7-201ENST00000406274 780 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 MIR1302-11-201ENST00000408051 138 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 MIR1302-9-201ENST00000408365 138 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 MIR1302-10-201ENST00000408734 138 ntBASIC3.13□□□□□ -1.91
HOXC6P09630 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXC6P09630 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms