Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DPB1P04440 AC012360.2-201ENST00000609349 391 ntBASIC1.77□□□□□ -2.13
HLA-DPB1P04440 AC005332.10-201ENST00000612725 619 ntBASIC1.77□□□□□ -2.13
HLA-DPB1P04440 Y_RNA.783-201ENST00000613546 102 ntBASIC1.77□□□□□ -2.13
HLA-DPB1P04440 AC009233.1-201ENST00000616477 371 ntBASIC1.77□□□□□ -2.13
HLA-DPB1P04440 HSPA8P4-201ENST00000511877 1920 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 SNORA3A-201ENST00000364113 130 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 RNY4P34-201ENST00000364779 95 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 RNU6-61P-201ENST00000365528 109 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 SNORA20.2-201ENST00000383922 131 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 RNU6-641P-201ENST00000384006 107 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 MIR578-201ENST00000384828 96 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 RNU2-39P-201ENST00000410604 198 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 RPS3AP3-201ENST00000411933 242 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AC097463.2-201ENST00000421074 142 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AL365338.1-201ENST00000422282 858 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AC003685.2-201ENST00000422795 395 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 RPS3AP44-201ENST00000425466 790 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 MTATP6P16-201ENST00000434543 526 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 snoU109.2-201ENST00000459316 135 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 RPL7P43-201ENST00000478876 753 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 MRPL42P6-201ENST00000486397 371 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AC068781.1-201ENST00000488231 618 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AC008526.1-201ENST00000509149 338 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 BNIP3P8-201ENST00000597863 560 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AC063944.3-201ENST00000609969 533 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AL359547.2-201ENST00000615810 418 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AL157786.1-207ENST00000627771 695 ntBASIC1.76□□□□□ -2.13
HLA-DPB1P04440 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DPB1P04440 SNORA38-201ENST00000363946 132 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 RNU6-297P-201ENST00000384636 107 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 MT-TH-201ENST00000387441 69 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 SNORA26.8-201ENST00000391306 124 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 RNU6-1140P-201ENST00000410517 106 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 Y_RNA.623-201ENST00000411128 95 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC127391.1-201ENST00000411737 98 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AL139156.1-201ENST00000412785 841 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 EEF1A1P40-201ENST00000412883 573 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 HMGN2P19-201ENST00000425149 265 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC003071.1-201ENST00000451219 789 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AL139109.1-201ENST00000455491 297 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC010486.2-201ENST00000505572 483 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC117522.1-201ENST00000509821 380 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 MIR892C-201ENST00000516410 77 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AP005902.1-201ENST00000521358 186 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC079598.5-201ENST00000547460 117 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 ADI1P3-201ENST00000549509 470 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC012414.6-201ENST00000568241 401 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 MTCYBP33-201ENST00000575007 1130 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC008521.1-201ENST00000587471 187 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AL670379.10-201ENST00000604330 253 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC090578.1-201ENST00000604955 591 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AL670379.9-201ENST00000605428 253 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AL139286.2-201ENST00000606838 396 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AL133173.2-201ENST00000614270 90 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC244517.12-201ENST00000623581 663 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC120349.3-201ENST00000624377 529 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 MIR219B-201ENST00000637023 88 ntBASIC1.75□□□□□ -2.13
HLA-DPB1P04440 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HLA-DPB1P04440 AC009487.4-201ENST00000624969 3585 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 RNU6-942P-201ENST00000363002 107 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 SNORD14B-201ENST00000364533 90 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 RNU6-384P-201ENST00000364900 104 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DPB1P04440 HMGN1P14-201ENST00000412459 517 ntBASIC1.74□□□□□ -2.13
HLA-DPB1P04440 NPM1P11-201ENST00000417106 855 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms