Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL355615.1-201ENST00000406187 641 ntBASIC-0.01□□□□□ -2.41
APOBP04114 MIR1468-201ENST00000410600 86 ntBASIC-0.01□□□□□ -2.41
APOBP04114 AL449283.1-202ENST00000418249 604 ntBASIC-0.01□□□□□ -2.41
APOBP04114 AC092634.2-201ENST00000428146 1010 ntBASIC-0.01□□□□□ -2.41
APOBP04114 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC-0.01□□□□□ -2.41
APOBP04114 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC-0.01□□□□□ -2.41
APOBP04114 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.01□□□□□ -2.41
APOBP04114 Z77249.1-201ENST00000444622 1175 ntBASIC-0.01□□□□□ -2.41
APOBP04114 AC022447.1-201ENST00000515358 464 ntBASIC-0.01□□□□□ -2.41
APOBP04114 AC105224.1-201ENST00000587055 421 ntBASIC-0.01□□□□□ -2.41
APOBP04114 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.01□□□□□ -2.41
APOBP04114 AC095031.1-201ENST00000623685 672 ntBASIC-0.01□□□□□ -2.41
APOBP04114 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
APOBP04114 MIR424-201ENST00000362227 98 ntBASIC-0.01□□□□□ -2.41
APOBP04114 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.01□□□□□ -2.41
APOBP04114 RNY4P24-201ENST00000362735 96 ntBASIC-0.01□□□□□ -2.41
APOBP04114 MIR200A-201ENST00000384875 90 ntBASIC-0.01□□□□□ -2.41
APOBP04114 MIR506-201ENST00000384998 124 ntBASIC-0.01□□□□□ -2.41
APOBP04114 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
APOBP04114 RNU6-197P-201ENST00000516680 100 ntBASIC-0.01□□□□□ -2.41
APOBP04114 AL022345.2-201ENST00000606307 135 ntBASIC-0.01□□□□□ -2.41
APOBP04114 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC-0.01□□□□□ -2.41
APOBP04114 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
APOBP04114 RNU6-271P-201ENST00000363858 105 ntBASIC-0.01□□□□□ -2.41
APOBP04114 MTCO3P12-201ENST00000416718 547 ntBASIC-0.01□□□□□ -2.41
APOBP04114 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC-0.01□□□□□ -2.41
APOBP04114 MTCO1P53-201ENST00000441633 699 ntBASIC-0.01□□□□□ -2.41
APOBP04114 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
APOBP04114 SCARNA16.2-201ENST00000516520 172 ntBASIC-0.01□□□□□ -2.41
APOBP04114 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.01□□□□□ -2.41
APOBP04114 U4.2-201ENST00000618561 85 ntBASIC-0.01□□□□□ -2.41
APOBP04114 AL512506.2-201ENST00000624472 458 ntBASIC-0.01□□□□□ -2.41
APOBP04114 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC-0.01□□□□□ -2.41
APOBP04114 SNORA32.1-201ENST00000364514 115 ntBASIC-0.01□□□□□ -2.41
APOBP04114 MICF-203ENST00000432679 129 ntBASIC-0.01□□□□□ -2.41
APOBP04114 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.01□□□□□ -2.41
APOBP04114 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC-0.01□□□□□ -2.41
APOBP04114 SNRPGP16-201ENST00000533275 226 ntBASIC-0.01□□□□□ -2.41
APOBP04114 MTND2P17-201ENST00000550281 688 ntBASIC-0.01□□□□□ -2.41
APOBP04114 EIF1P4-201ENST00000572664 335 ntBASIC-0.01□□□□□ -2.41
APOBP04114 AC090578.1-201ENST00000604955 591 ntBASIC-0.01□□□□□ -2.41
APOBP04114 ZNF663P-202ENST00000641770 1131 ntBASIC-0.01□□□□□ -2.41
APOBP04114 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
APOBP04114 HMGN2P39-201ENST00000398005 273 ntBASIC-0.02□□□□□ -2.41
APOBP04114 MTND2P8-201ENST00000450555 1025 ntBASIC-0.02□□□□□ -2.41
APOBP04114 snoU13.28-201ENST00000459235 104 ntBASIC-0.02□□□□□ -2.41
APOBP04114 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
APOBP04114 AL138963.2-201ENST00000605137 226 ntBASIC-0.02□□□□□ -2.41
APOBP04114 AC018638.7-201ENST00000605836 1114 ntBASIC-0.02□□□□□ -2.41
APOBP04114 OR5T3-201ENST00000303059 1023 ntBASIC-0.02□□□□□ -2.41
APOBP04114 RNA5SP214-201ENST00000363378 118 ntBASIC-0.02□□□□□ -2.41
APOBP04114 RNU4-9P-201ENST00000364951 139 ntBASIC-0.02□□□□□ -2.41
APOBP04114 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.02□□□□□ -2.41
APOBP04114 RPL22P18-201ENST00000417197 377 ntBASIC-0.02□□□□□ -2.41
APOBP04114 AC016717.1-201ENST00000448918 286 ntBASIC-0.02□□□□□ -2.41
APOBP04114 MED28P6-201ENST00000558776 231 ntBASIC-0.02□□□□□ -2.41
APOBP04114 AC009712.1-201ENST00000564938 316 ntBASIC-0.02□□□□□ -2.41
APOBP04114 AC098614.4-201ENST00000607601 462 ntBASIC-0.02□□□□□ -2.41
APOBP04114 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.02□□□□□ -2.41
APOBP04114 SNORD118-201ENST00000363593 134 ntBASIC-0.02□□□□□ -2.41
APOBP04114 RNU6-546P-201ENST00000383991 107 ntBASIC-0.02□□□□□ -2.41
APOBP04114 RNU2-7P-201ENST00000410794 178 ntBASIC-0.02□□□□□ -2.41
APOBP04114 AC069282.1-201ENST00000411911 526 ntBASIC-0.02□□□□□ -2.41
APOBP04114 AC099677.1-201ENST00000420575 175 ntBASIC-0.02□□□□□ -2.41
APOBP04114 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC-0.02□□□□□ -2.41
APOBP04114 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC-0.02□□□□□ -2.41
APOBP04114 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC-0.02□□□□□ -2.41
APOBP04114 SCARNA8-201ENST00000515924 131 ntBASIC-0.02□□□□□ -2.41
APOBP04114 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.02□□□□□ -2.41
APOBP04114 RNA5SP137-201ENST00000516833 135 ntBASIC-0.02□□□□□ -2.41
APOBP04114 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
APOBP04114 AC022254.1-201ENST00000567857 235 ntBASIC-0.02□□□□□ -2.41
APOBP04114 MIR4764-201ENST00000580680 88 ntBASIC-0.02□□□□□ -2.41
APOBP04114 AC069114.2-201ENST00000604699 304 ntBASIC-0.02□□□□□ -2.41
APOBP04114 RNU6-1074P-201ENST00000383995 104 ntBASIC-0.03□□□□□ -2.41
APOBP04114 RNU6-950P-201ENST00000384651 107 ntBASIC-0.03□□□□□ -2.41
APOBP04114 AC025465.3-201ENST00000510570 311 ntBASIC-0.03□□□□□ -2.41
APOBP04114 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC-0.03□□□□□ -2.41
APOBP04114 SNORA31.22-201ENST00000517204 135 ntBASIC-0.03□□□□□ -2.41
APOBP04114 OR5AK1P-201ENST00000524837 922 ntBASIC-0.03□□□□□ -2.41
APOBP04114 AL391834.1-201ENST00000609609 560 ntBASIC-0.03□□□□□ -2.41
APOBP04114 OR5AK4P-201ENST00000635912 903 ntBASIC-0.03□□□□□ -2.41
APOBP04114 RNU6-654P-201ENST00000364373 107 ntBASIC-0.03□□□□□ -2.41
APOBP04114 RNU6-1035P-201ENST00000384477 107 ntBASIC-0.03□□□□□ -2.41
APOBP04114 RNU6-1197P-201ENST00000391183 107 ntBASIC-0.03□□□□□ -2.41
APOBP04114 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC-0.03□□□□□ -2.41
APOBP04114 LARP7P4-201ENST00000481075 878 ntBASIC-0.03□□□□□ -2.41
APOBP04114 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC-0.03□□□□□ -2.41
APOBP04114 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC-0.03□□□□□ -2.41
APOBP04114 RAB11AP2-201ENST00000545905 639 ntBASIC-0.03□□□□□ -2.41
APOBP04114 AL022345.1-201ENST00000607292 135 ntBASIC-0.03□□□□□ -2.41
APOBP04114 AC100812.1-201ENST00000607622 580 ntBASIC-0.03□□□□□ -2.41
APOBP04114 AC097372.4-201ENST00000625025 466 ntBASIC-0.03□□□□□ -2.41
APOBP04114 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.03□□□□□ -2.41
APOBP04114 RPL21P47-201ENST00000483696 477 ntBASIC-0.03□□□□□ -2.41
APOBP04114 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.03□□□□□ -2.41
APOBP04114 AC025423.2-201ENST00000537570 439 ntBASIC-0.03□□□□□ -2.41
APOBP04114 AL158163.2-201ENST00000619110 700 ntBASIC-0.03□□□□□ -2.41
APOBP04114 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
APOBP04114 RN7SKP277-201ENST00000516895 283 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms