Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQA2P01906 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.95□□□□□ -1.94
HLA-DQA2P01906 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HLA-DQA2P01906 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.95□□□□□ -1.94
HLA-DQA2P01906 AC073544.1-201ENST00000600110 1595 ntBASIC2.95□□□□□ -1.94
HLA-DQA2P01906 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DQA2P01906 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.95□□□□□ -1.94
HLA-DQA2P01906 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 CDC27P3-201ENST00000635418 1910 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 RNU4-79P-201ENST00000362764 141 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 CD24P4-201ENST00000382840 243 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 RN7SKP158-201ENST00000410453 326 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 RPL32P35-201ENST00000415214 394 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 UBE2V1P4-201ENST00000425374 344 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AC006946.1-201ENST00000429106 328 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 FABP5P14-201ENST00000437273 393 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 RPL21P23-201ENST00000446654 460 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AC115115.1-201ENST00000449927 248 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 RN7SL330P-201ENST00000469709 307 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AP002884.2-201ENST00000471647 395 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 MRPL42P6-201ENST00000486397 371 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 SNORD59.2-201ENST00000516873 68 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AC023632.4-201ENST00000517783 191 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AP004607.1-201ENST00000524456 203 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 TRAV32-201ENST00000553993 340 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 FRG2DP-202ENST00000566967 323 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AL160281.1-201ENST00000605307 311 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AC004852.3-201ENST00000614131 326 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AC022140.2-201ENST00000623500 188 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AC091903.1-201ENST00000624322 454 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 SCARNA4-202ENST00000625402 129 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 U4.7-201ENST00000638126 106 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HLA-DQA2P01906 AC091152.2-201ENST00000591628 2569 ntBASIC2.94□□□□□ -1.94
HLA-DQA2P01906 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 RNU6-527P-201ENST00000363425 104 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 SNORD56.3-201ENST00000363507 71 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 RNU6-1317P-201ENST00000364582 104 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 Y_RNA.384-201ENST00000383909 102 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 SNORD116-20-201ENST00000384529 92 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 PTMAP5-201ENST00000393073 333 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 AL117339.3-201ENST00000418733 162 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 NCOR1P3-201ENST00000420479 303 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 AL161651.1-201ENST00000440882 223 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 Y_RNA.635-201ENST00000459041 101 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 Y_RNA.632-201ENST00000459189 102 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 RNU6-559P-201ENST00000516151 98 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 AC104027.1-201ENST00000521887 300 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 AC010653.1-201ENST00000571108 881 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 MIR4276-201ENST00000584832 70 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 AC135507.2-201ENST00000612443 309 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 AC006026.1-201ENST00000444025 1803 ntBASIC2.93□□□□□ -1.94
HLA-DQA2P01906 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
HLA-DQA2P01906 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DQA2P01906 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.92□□□□□ -1.94
HLA-DQA2P01906 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DQA2P01906 RPL9P7-201ENST00000330965 580 ntBASIC2.92□□□□□ -1.94
HLA-DQA2P01906 SNORD62.1-201ENST00000362541 86 ntBASIC2.92□□□□□ -1.94
HLA-DQA2P01906 RNA5SP50-201ENST00000363731 107 ntBASIC2.92□□□□□ -1.94
HLA-DQA2P01906 RNU6-336P-201ENST00000364891 107 ntBASIC2.92□□□□□ -1.94
HLA-DQA2P01906 SNORA73.2-201ENST00000364946 201 ntBASIC2.92□□□□□ -1.94
HLA-DQA2P01906 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HLA-DQA2P01906 Y_RNA.387-201ENST00000383918 102 ntBASIC2.92□□□□□ -1.94
HLA-DQA2P01906 Y_RNA.419-201ENST00000384041 102 ntBASIC2.92□□□□□ -1.94
HLA-DQA2P01906 AL360182.1-201ENST00000397433 468 ntBASIC2.92□□□□□ -1.94
HLA-DQA2P01906 AL133475.1-201ENST00000404414 305 ntBASIC2.92□□□□□ -1.94
HLA-DQA2P01906 RN7SKP111-201ENST00000410349 271 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms