Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL359198.2-201ENST00000611836 194 ntBASIC2.7□□□□□ -1.98
SSX4O60224 MIR7106-201ENST00000612419 65 ntBASIC2.7□□□□□ -1.98
SSX4O60224 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.7□□□□□ -1.98
SSX4O60224 MTND4P5-201ENST00000435821 1374 ntBASIC2.7□□□□□ -1.98
SSX4O60224 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SSX4O60224 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SSX4O60224 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SSX4O60224 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
SSX4O60224 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.69□□□□□ -1.98
SSX4O60224 SNORA5B-201ENST00000363786 132 ntBASIC2.69□□□□□ -1.98
SSX4O60224 SNORA80A-201ENST00000363922 136 ntBASIC2.69□□□□□ -1.98
SSX4O60224 RNU4-66P-201ENST00000365199 138 ntBASIC2.69□□□□□ -1.98
SSX4O60224 RNU1-100P-201ENST00000365255 165 ntBASIC2.69□□□□□ -1.98
SSX4O60224 RNU4-20P-201ENST00000365601 151 ntBASIC2.69□□□□□ -1.98
SSX4O60224 SNORD21-201ENST00000383953 95 ntBASIC2.69□□□□□ -1.98
SSX4O60224 Y_RNA.399-201ENST00000383955 105 ntBASIC2.69□□□□□ -1.98
SSX4O60224 RNU6-38P-201ENST00000384085 107 ntBASIC2.69□□□□□ -1.98
SSX4O60224 U3.37-201ENST00000408528 213 ntBASIC2.69□□□□□ -1.98
SSX4O60224 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.69□□□□□ -1.98
SSX4O60224 EIF1P1-201ENST00000421436 341 ntBASIC2.69□□□□□ -1.98
SSX4O60224 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.69□□□□□ -1.98
SSX4O60224 AC009296.1-201ENST00000443146 155 ntBASIC2.69□□□□□ -1.98
SSX4O60224 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.69□□□□□ -1.98
SSX4O60224 MTND3P16-201ENST00000452205 344 ntBASIC2.69□□□□□ -1.98
SSX4O60224 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.69□□□□□ -1.98
SSX4O60224 RNU6-333P-201ENST00000459117 107 ntBASIC2.69□□□□□ -1.98
SSX4O60224 MTCO3P38-201ENST00000468910 766 ntBASIC2.69□□□□□ -1.98
SSX4O60224 RN7SL20P-201ENST00000488827 297 ntBASIC2.69□□□□□ -1.98
SSX4O60224 MTAPP1-201ENST00000489154 819 ntBASIC2.69□□□□□ -1.98
SSX4O60224 RPL23AP94-201ENST00000512518 302 ntBASIC2.69□□□□□ -1.98
SSX4O60224 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.69□□□□□ -1.98
SSX4O60224 AC008885.1-201ENST00000514930 301 ntBASIC2.69□□□□□ -1.98
SSX4O60224 RN7SKP272-201ENST00000516988 232 ntBASIC2.69□□□□□ -1.98
SSX4O60224 HSPE1P20-201ENST00000538133 289 ntBASIC2.69□□□□□ -1.98
SSX4O60224 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.69□□□□□ -1.98
SSX4O60224 AC011890.2-201ENST00000613393 294 ntBASIC2.69□□□□□ -1.98
SSX4O60224 AC010378.1-201ENST00000619270 362 ntBASIC2.69□□□□□ -1.98
SSX4O60224 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.69□□□□□ -1.98
SSX4O60224 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
SSX4O60224 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SSX4O60224 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SSX4O60224 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SSX4O60224 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.68□□□□□ -1.98
SSX4O60224 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SSX4O60224 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SSX4O60224 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.68□□□□□ -1.98
SSX4O60224 RNY3P3-201ENST00000363816 102 ntBASIC2.68□□□□□ -1.98
SSX4O60224 RNU6-72P-201ENST00000384285 79 ntBASIC2.68□□□□□ -1.98
SSX4O60224 Y_RNA.510-201ENST00000384511 114 ntBASIC2.68□□□□□ -1.98
SSX4O60224 SNORA44-201ENST00000384584 132 ntBASIC2.68□□□□□ -1.98
SSX4O60224 SNORD88.1-201ENST00000408684 91 ntBASIC2.68□□□□□ -1.98
SSX4O60224 RN7SKP220-201ENST00000410611 288 ntBASIC2.68□□□□□ -1.98
SSX4O60224 BX682237.1-201ENST00000415016 335 ntBASIC2.68□□□□□ -1.98
SSX4O60224 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.68□□□□□ -1.98
SSX4O60224 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.68□□□□□ -1.98
SSX4O60224 AL121601.2-201ENST00000438019 707 ntBASIC2.68□□□□□ -1.98
SSX4O60224 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.68□□□□□ -1.98
SSX4O60224 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.68□□□□□ -1.98
SSX4O60224 RNU6-1038P-201ENST00000516516 104 ntBASIC2.68□□□□□ -1.98
SSX4O60224 Y_RNA.687-201ENST00000516558 91 ntBASIC2.68□□□□□ -1.98
SSX4O60224 SNORD60.2-201ENST00000516883 86 ntBASIC2.68□□□□□ -1.98
SSX4O60224 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.68□□□□□ -1.98
SSX4O60224 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.68□□□□□ -1.98
SSX4O60224 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.68□□□□□ -1.98
SSX4O60224 MTCO3P13-201ENST00000577757 781 ntBASIC2.68□□□□□ -1.98
SSX4O60224 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.68□□□□□ -1.98
SSX4O60224 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.68□□□□□ -1.98
SSX4O60224 AC020895.1-201ENST00000595362 272 ntBASIC2.68□□□□□ -1.98
SSX4O60224 AP003465.2-201ENST00000602571 373 ntBASIC2.68□□□□□ -1.98
SSX4O60224 AL391813.1-201ENST00000603098 260 ntBASIC2.68□□□□□ -1.98
SSX4O60224 AC093732.2-201ENST00000607950 274 ntBASIC2.68□□□□□ -1.98
SSX4O60224 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.68□□□□□ -1.98
SSX4O60224 U2.17-201ENST00000611454 95 ntBASIC2.68□□□□□ -1.98
SSX4O60224 DISC2.1-201ENST00000612827 205 ntBASIC2.68□□□□□ -1.98
SSX4O60224 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.68□□□□□ -1.98
SSX4O60224 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.68□□□□□ -1.98
SSX4O60224 MIR3688-2-201ENST00000636963 87 ntBASIC2.68□□□□□ -1.98
SSX4O60224 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SSX4O60224 AC004944.1-201ENST00000517807 3059 ntBASIC2.68□□□□□ -1.98
SSX4O60224 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.68□□□□□ -1.98
SSX4O60224 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
SSX4O60224 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SSX4O60224 RNU6-451P-201ENST00000362921 107 ntBASIC2.67□□□□□ -1.98
SSX4O60224 SNORD56.5-201ENST00000364281 72 ntBASIC2.67□□□□□ -1.98
SSX4O60224 SNORA71.1-201ENST00000364523 117 ntBASIC2.67□□□□□ -1.98
SSX4O60224 Y_RNA.324-201ENST00000365165 102 ntBASIC2.67□□□□□ -1.98
SSX4O60224 Y_RNA.453-201ENST00000384223 109 ntBASIC2.67□□□□□ -1.98
SSX4O60224 SNORD15B-201ENST00000384714 146 ntBASIC2.67□□□□□ -1.98
SSX4O60224 RNA5SP492-201ENST00000411330 114 ntBASIC2.67□□□□□ -1.98
SSX4O60224 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.67□□□□□ -1.98
SSX4O60224 RPS3AP44-201ENST00000425466 790 ntBASIC2.67□□□□□ -1.98
SSX4O60224 TOMM20P4-201ENST00000427861 435 ntBASIC2.67□□□□□ -1.98
SSX4O60224 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.67□□□□□ -1.98
SSX4O60224 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.67□□□□□ -1.98
SSX4O60224 RNU7-167P-201ENST00000459160 62 ntBASIC2.67□□□□□ -1.98
SSX4O60224 DYNLL1P5-201ENST00000467158 270 ntBASIC2.67□□□□□ -1.98
SSX4O60224 RPL21P99-201ENST00000480369 423 ntBASIC2.67□□□□□ -1.98
SSX4O60224 AC092989.1-201ENST00000481235 277 ntBASIC2.67□□□□□ -1.98
SSX4O60224 RN7SL633P-201ENST00000488974 297 ntBASIC2.67□□□□□ -1.98
SSX4O60224 AC097462.2-201ENST00000504623 481 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms