Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF223E7ERA6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF223E7ERA6 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF223E7ERA6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
RNF223E7ERA6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF223E7ERA6 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF223E7ERA6 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF223E7ERA6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF223E7ERA6 RNU6-600P-201ENST00000362524 99 ntBASIC4.5□□□□□ -1.69
RNF223E7ERA6 SNORD1C-201ENST00000363315 78 ntBASIC4.5□□□□□ -1.69
RNF223E7ERA6 RNU6-271P-201ENST00000363858 105 ntBASIC4.5□□□□□ -1.69
RNF223E7ERA6 MIR105-1-201ENST00000385222 81 ntBASIC4.5□□□□□ -1.69
RNF223E7ERA6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF223E7ERA6 RPL7AP49-201ENST00000429522 581 ntBASIC4.5□□□□□ -1.69
RNF223E7ERA6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF223E7ERA6 AL591438.1-201ENST00000433508 581 ntBASIC4.5□□□□□ -1.69
RNF223E7ERA6 MIR4458-201ENST00000578872 75 ntBASIC4.5□□□□□ -1.69
RNF223E7ERA6 AL133481.2-203ENST00000607558 139 ntBASIC4.5□□□□□ -1.69
RNF223E7ERA6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF223E7ERA6 AC100757.1-201ENST00000616872 1835 ntBASIC4.5□□□□□ -1.69
RNF223E7ERA6 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF223E7ERA6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
RNF223E7ERA6 OR4F13P-202ENST00000560066 2054 ntBASIC4.5□□□□□ -1.69
RNF223E7ERA6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF223E7ERA6 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF223E7ERA6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF223E7ERA6 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNF223E7ERA6 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNF223E7ERA6 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF223E7ERA6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF223E7ERA6 BCORP1-203ENST00000513194 5093 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 AL353796.1-201ENST00000561542 3241 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF223E7ERA6 AC103988.1-201ENST00000566382 2177 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
RNF223E7ERA6 SNORA27.1-201ENST00000362604 124 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 Y_RNA.111-201ENST00000363248 100 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 RNU6-279P-201ENST00000391297 101 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 AC007161.1-204ENST00000423039 460 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 AC073261.1-201ENST00000429409 121 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 NDUFB1P1-201ENST00000435191 180 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 AL645939.1-201ENST00000453429 797 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 RN7SL738P-201ENST00000470264 297 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 RNA5SP367-201ENST00000516557 118 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 AP004607.2-201ENST00000533949 322 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
RNF223E7ERA6 AC021739.1-201ENST00000559631 174 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 MIR2681-201ENST00000581814 105 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 RN7SL52P-201ENST00000584271 284 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 SNRPGP15-201ENST00000600149 222 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 RN7SL722P-201ENST00000617780 284 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 RN7SL565P-201ENST00000618246 284 ntBASIC4.49□□□□□ -1.69
RNF223E7ERA6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
RNF223E7ERA6 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF223E7ERA6 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNF223E7ERA6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RNF223E7ERA6 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
RNF223E7ERA6 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
RNF223E7ERA6 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNF223E7ERA6 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNF223E7ERA6 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF223E7ERA6 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNF223E7ERA6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF223E7ERA6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF223E7ERA6 AL356292.1-201ENST00000283110 373 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 RNU4-15P-201ENST00000362613 141 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 RNA5SP326-201ENST00000363209 110 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 RNU6-1305P-201ENST00000364353 104 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 RNY1P1-201ENST00000364372 112 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 RNU6-1276P-201ENST00000365372 104 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 RNU6-242P-201ENST00000384359 107 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RNF223E7ERA6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF223E7ERA6 TOMM22P1-201ENST00000418578 312 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 HMGN2P20-201ENST00000437531 273 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 AL356535.1-201ENST00000440335 398 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 RPL23AP91-201ENST00000569211 455 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 MIR4662B-201ENST00000579498 81 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 AC006115.2-201ENST00000596823 202 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 uc_338.18-201ENST00000615451 175 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 BMS1P21-201ENST00000634565 365 ntBASIC4.48□□□□□ -1.69
RNF223E7ERA6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF223E7ERA6 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
RNF223E7ERA6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF223E7ERA6 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RNF223E7ERA6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF223E7ERA6 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RNF223E7ERA6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
RNF223E7ERA6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
RNF223E7ERA6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF223E7ERA6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
RNF223E7ERA6 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF223E7ERA6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF223E7ERA6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF223E7ERA6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RNF223E7ERA6 RNU6-1181P-201ENST00000384191 106 ntBASIC4.47□□□□□ -1.69
RNF223E7ERA6 MIR586-201ENST00000385035 97 ntBASIC4.47□□□□□ -1.69
RNF223E7ERA6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF223E7ERA6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms