Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC007490.1-201ENST00000624321 703 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AC007785.2-201ENST00000598627 1916 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 U3.20-201ENST00000390909 217 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 BPY2DP-201ENST00000422208 265 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 ZNF863P-201ENST00000426746 417 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 RPL30P4-201ENST00000429309 333 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 TRGVB-201ENST00000453257 471 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 MRPS36P2-201ENST00000512569 299 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 DEFB108A-201ENST00000530110 222 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AC144521.1-201ENST00000607148 956 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AL355472.4-201ENST00000610233 626 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 SDR42E1P2-201ENST00000614861 481 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 SDR42E1P4-201ENST00000620894 481 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AL078595.3-201ENST00000623815 1166 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AC079597.1-201ENST00000624306 508 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 MIR924-201ENST00000638017 53 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 AP000776.1-201ENST00000530032 1663 ntBASIC1.01□□□□□ -2.25
COL6A6A6NMZ7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 Y_RNA.18-201ENST00000362461 102 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 RNU6-1284P-201ENST00000363701 100 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 RNU6-1242P-201ENST00000391052 103 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AL359634.1-202ENST00000404721 284 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 RPL31P63-201ENST00000422565 375 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AC005094.1-201ENST00000440420 368 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 AL359385.1-201ENST00000456509 365 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 RNU6-1132P-201ENST00000459214 107 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 RNA5SP290-201ENST00000517133 127 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 CYCSP26-201ENST00000534107 320 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 AC087465.1-201ENST00000560574 245 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 HMGN2P15-201ENST00000585707 270 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AC107952.2-201ENST00000606048 486 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1□□□□□ -2.25
COL6A6A6NMZ7 DUSP12P1-201ENST00000612874 516 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AP001486.3-201ENST00000615334 372 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 TEX21P-201ENST00000447107 1476 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 MIR532-201ENST00000385025 91 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 USP9YP33-201ENST00000412220 421 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 RPS24P7-201ENST00000416921 246 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 BX119904.4-201ENST00000424402 301 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 USP9YP35-201ENST00000435696 412 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 AC020550.1-201ENST00000447385 163 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 RPL30P6-201ENST00000475925 342 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AC091951.3-201ENST00000504093 246 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 RNA5SP471-201ENST00000516971 106 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 MRPS36P3-201ENST00000519284 130 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 CBX3P8-201ENST00000532412 525 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 PCMTD1P2-201ENST00000565017 355 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1□□□□□ -2.25
COL6A6A6NMZ7 MIR4658-201ENST00000584344 65 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 MIR4999-201ENST00000585029 91 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1□□□□□ -2.25
COL6A6A6NMZ7 AC007742.2-201ENST00000618226 398 ntBASIC1□□□□□ -2.25
COL6A6A6NMZ7 AL603758.1-201ENST00000618654 241 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms