Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 NCAPGP1-201ENST00000505112 1814 ntBASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 RNU6-1025P-201ENST00000410629 104 ntBASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 TMEM167AP1-201ENST00000423409 219 ntBASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL445305.1-201ENST00000432577 575 ntBASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 CKS1BP5-201ENST00000434172 273 ntBASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 HIGD1AP2-201ENST00000446367 280 ntBASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 RN7SL601P-201ENST00000471221 293 ntBASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 HSPE1P6-201ENST00000479457 291 ntBASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 RAC1P2-201ENST00000511164 579 ntBASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC103996.1-201ENST00000555468 102 ntBASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 MIR4643-201ENST00000577473 78 ntBASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC132825.6-201ENST00000638861 357 ntBASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LOC102724428A0A0B4J2F2 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 NEAT1-202ENST00000501122 22743 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 SNORD9-201ENST00000362566 104 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 RNU6-1167P-201ENST00000363227 94 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 RNA5SP50-201ENST00000363731 107 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 RNU6-125P-201ENST00000384505 107 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 Y_RNA.541-201ENST00000384640 113 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 SNORA12.2-201ENST00000391040 156 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 MTCO3P29-201ENST00000432119 779 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 SNORA71B-202ENST00000439232 272 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC079354.2-201ENST00000453523 154 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 RPL23AP45-201ENST00000476406 468 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 RPS29P2-201ENST00000479278 136 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 RPL32P34-201ENST00000486380 400 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 CBX3P4-201ENST00000538909 354 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC004024.1-201ENST00000549244 247 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL121603.1-201ENST00000553815 142 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL713866.2-201ENST00000603579 219 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL365440.1-201ENST00000436135 2167 ntBASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LOC102724428A0A0B4J2F2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 MIR412-201ENST00000362142 91 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 U3.6-201ENST00000363622 211 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 Y_RNA.199-201ENST00000364014 102 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 Y_RNA.405-201ENST00000383979 100 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 Y_RNA.451-201ENST00000384200 100 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 Y_RNA.524-201ENST00000384564 100 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 Y_RNA.561-201ENST00000384694 100 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 Y_RNA.581-201ENST00000391017 97 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 RNU7-120P-201ENST00000459334 63 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 RNU7-87P-201ENST00000459343 62 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC107393.1-201ENST00000512403 346 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 SERF1AP1-201ENST00000514575 187 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 SNORA25.14-201ENST00000516481 132 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 RNU6-612P-201ENST00000516909 102 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 AP002770.2-201ENST00000543613 532 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 MIR4458-201ENST00000578872 75 ntBASIC4.8□□□□□ -1.64
LOC102724428A0A0B4J2F2 AL161798.1-201ENST00000604630 131 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms