Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 U4.7-201ENST00000638126 106 ntBASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COL4A3BPQ9Y5P4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 SNORD116-20-201ENST00000384529 92 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 AL512633.1-201ENST00000399931 655 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 SNORA11.1-201ENST00000408133 129 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 RPL21P111-201ENST00000418453 477 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 MTND4LP16-201ENST00000440828 295 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 RNU7-66P-201ENST00000459469 62 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 FCF1P8-201ENST00000510322 597 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 AC087241.2-201ENST00000535801 324 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 AC025423.5-201ENST00000550230 219 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
COL4A3BPQ9Y5P4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 RNU6-487P-201ENST00000365430 104 ntBASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 RPL35AP12-201ENST00000425362 338 ntBASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 AC021205.2-201ENST00000480069 347 ntBASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 AC008628.2-201ENST00000502605 298 ntBASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 AC107934.2-201ENST00000518653 310 ntBASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 MIR3186-201ENST00000577404 85 ntBASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 AC009248.2-201ENST00000619826 254 ntBASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 AL356274.2-201ENST00000624379 3752 ntBASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.78□□□□□ -1.8
COL4A3BPQ9Y5P4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 AC017071.1-201ENST00000564407 2204 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-527P-201ENST00000363425 104 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 AP002088.1-201ENST00000382740 395 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-843P-201ENST00000384454 104 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 U3.26-201ENST00000391236 204 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 Z99755.1-201ENST00000414048 380 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 AC005326.1-201ENST00000429197 123 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 AL591043.1-201ENST00000432461 424 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 RPS15AP10-201ENST00000432472 382 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 RPL23AP58-201ENST00000440453 469 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 MTCO2P30-201ENST00000503662 364 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 MTCYBP40-201ENST00000509390 1135 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-256P-201ENST00000516747 97 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 MIR2276-201ENST00000516886 89 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 AC100830.2-201ENST00000581636 240 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 AL022345.1-201ENST00000607292 135 ntBASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.77□□□□□ -1.81
COL4A3BPQ9Y5P4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AC073346.2-201ENST00000624724 2058 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 CBX3P1-201ENST00000325243 554 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 Y_RNA.279-201ENST00000364763 95 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 SNORD21-201ENST00000383953 95 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-767P-201ENST00000384132 107 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AC126124.2-201ENST00000413542 321 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 VN1R36P-201ENST00000414936 291 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 UBE2V1P4-201ENST00000425374 344 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AC010401.1-201ENST00000463867 348 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AC133134.1-201ENST00000466800 359 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 AC046134.1-201ENST00000514454 666 ntBASIC3.76□□□□□ -1.81
COL4A3BPQ9Y5P4 RNU5B-3P-201ENST00000516601 115 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms