Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 U8.6-201ENST00000364939 135 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 RN7SKP153-201ENST00000365026 316 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 Y_RNA.388-201ENST00000383919 113 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 RNU6-629P-201ENST00000384061 103 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 SNORA26.2-201ENST00000390922 122 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 Y_RNA.625-201ENST00000411256 107 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 AC245028.1-201ENST00000423259 256 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 AC009963.2-201ENST00000453431 138 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 RNU7-141P-201ENST00000459304 62 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 AC006517.1-201ENST00000480485 328 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 RNU2-60P-201ENST00000517290 128 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 MIR4724-201ENST00000579485 89 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 AL356575.1-201ENST00000603008 283 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 AC120024.3-201ENST00000603167 156 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 AC004832.5-201ENST00000608677 401 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 CR381572.2-201ENST00000624852 397 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 AC022893.2-201ENST00000564832 3296 ntBASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PCDHB3Q9Y5E6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 AP001642.1-201ENST00000624727 2117 ntBASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 RNU1-106P-201ENST00000384382 164 ntBASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 RNU6-880P-201ENST00000384526 107 ntBASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 MIR105-1-201ENST00000385222 81 ntBASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 RNU6-855P-201ENST00000410395 104 ntBASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 AC104333.2-201ENST00000422630 192 ntBASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 RN7SL814P-201ENST00000487715 300 ntBASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 SNORA31.20-201ENST00000517111 133 ntBASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 RNA5SP373-201ENST00000517271 95 ntBASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 MIR4472-2-201ENST00000582069 67 ntBASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 AL121890.5-201ENST00000620848 304 ntBASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHB3Q9Y5E6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 SNORD58C-201ENST00000365223 64 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 RNU1-100P-201ENST00000365255 165 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 Y_RNA.415-201ENST00000384012 112 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 SNORA18.3-201ENST00000384122 132 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 AC007738.1-201ENST00000413892 348 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 AL590383.1-201ENST00000428602 75 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 RNU6-107P-201ENST00000516643 102 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 SNORA31.23-201ENST00000517219 133 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 RNU4-60P-201ENST00000517239 135 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 AL390726.5-202ENST00000564800 256 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 AC011447.4-201ENST00000587562 111 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 AC106754.2-201ENST00000623006 233 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 Z82209.1-201ENST00000422141 2135 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 AC118273.1-201ENST00000525324 3006 ntBASIC5.05□□□□□ -1.6
PCDHB3Q9Y5E6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms