Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHB4Q9Y5E5 AP002826.1-201ENST00000608835 315 ntBASIC3.97□□□□□ -1.77
PCDHB4Q9Y5E5 HMGB1P24-202ENST00000615653 685 ntBASIC3.97□□□□□ -1.77
PCDHB4Q9Y5E5 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.97□□□□□ -1.77
PCDHB4Q9Y5E5 U7.8-201ENST00000619968 63 ntBASIC3.97□□□□□ -1.77
PCDHB4Q9Y5E5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHB4Q9Y5E5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
PCDHB4Q9Y5E5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.97□□□□□ -1.77
PCDHB4Q9Y5E5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PCDHB4Q9Y5E5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PCDHB4Q9Y5E5 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
PCDHB4Q9Y5E5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 MTND5P27-201ENST00000428871 1720 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 RNU1-18P-201ENST00000363062 164 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 Y_RNA.307-201ENST00000365022 117 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 Y_RNA.396-201ENST00000383949 103 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 MIR10A-201ENST00000385043 110 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 RPL21P1-201ENST00000399532 476 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 MIR1290-201ENST00000408735 78 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 U3.42-201ENST00000408746 214 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 SNORA57.3-201ENST00000411095 141 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 AL117339.3-201ENST00000418733 162 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 AL627311.1-201ENST00000431514 115 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 NDUFB1P1-201ENST00000435191 180 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 OSTCP8-201ENST00000445117 448 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 CEACAMP4-201ENST00000457676 421 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 AL133162.1-201ENST00000463228 453 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 AC133134.1-201ENST00000466800 359 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 RPL23AP45-201ENST00000476406 468 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 AC104564.1-201ENST00000493028 407 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 SNORA70.16-201ENST00000516390 95 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 AC004584.2-201ENST00000570407 410 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 AC006600.1-201ENST00000572529 153 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 AC062037.2-201ENST00000610137 73 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 MIR1244-1-201ENST00000612829 85 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 MIR1244-3-201ENST00000635744 85 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 MIR1244-2-201ENST00000636449 85 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 MIR1244-4-202ENST00000636813 85 ntBASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHB4Q9Y5E5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 RNU6-741P-201ENST00000383889 107 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 MIR521-1-201ENST00000384902 87 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 MIR625-201ENST00000385047 85 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 RNU6-847P-201ENST00000411115 108 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 PIGFP3-201ENST00000441918 722 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 DYNLT3P2-201ENST00000442517 295 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 RPS3AP46-201ENST00000448352 682 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 RNU7-169P-201ENST00000459456 61 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 RPL23AP62-201ENST00000463396 453 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 KC877373.1-201ENST00000479066 408 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 AL049830.2-201ENST00000480072 201 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 AC139453.3-201ENST00000493276 369 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 AC026402.1-201ENST00000513642 170 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 MIR5187-201ENST00000583479 76 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 RNU1-30P-201ENST00000606575 163 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 AL442067.1-201ENST00000613261 223 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 MIR8062-201ENST00000621515 85 ntBASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHB4Q9Y5E5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHB4Q9Y5E5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
PCDHB4Q9Y5E5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHB4Q9Y5E5 ZNF299P-201ENST00000406845 1804 ntBASIC3.94□□□□□ -1.78
PCDHB4Q9Y5E5 RNU6-874P-201ENST00000362390 105 ntBASIC3.94□□□□□ -1.78
PCDHB4Q9Y5E5 RNU6-379P-201ENST00000363813 104 ntBASIC3.94□□□□□ -1.78
PCDHB4Q9Y5E5 SNORA40C-201ENST00000391285 128 ntBASIC3.94□□□□□ -1.78
PCDHB4Q9Y5E5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHB4Q9Y5E5 TOMM20P4-201ENST00000427861 435 ntBASIC3.94□□□□□ -1.78
PCDHB4Q9Y5E5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHB4Q9Y5E5 AC073910.1-201ENST00000445047 438 ntBASIC3.94□□□□□ -1.78
PCDHB4Q9Y5E5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHB4Q9Y5E5 OR2AQ1P-201ENST00000451972 200 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms