Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 MIR181A1-201ENST00000385026 110 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 MIR34A-201ENST00000385130 110 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 SNORD70.1-201ENST00000391007 85 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 FCF1P9-201ENST00000412546 282 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 EEF1A1P41-201ENST00000414667 207 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 SCARNA18-201ENST00000459004 134 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 SEM1P1-201ENST00000506694 209 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AC011352.1-201ENST00000512300 793 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AC074344.1-201ENST00000512823 224 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 MTND4LP26-201ENST00000518144 282 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AK6P1-201ENST00000540219 478 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 GLYCAM1-201ENST00000546596 285 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AC025678.1-201ENST00000567861 338 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AC106782.4-201ENST00000568264 210 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 LRRC37A5P-203ENST00000580181 585 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 MIR5583-1-201ENST00000580941 59 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AC091152.3-201ENST00000604227 325 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AC007179.3-201ENST00000604976 235 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AC096577.2-201ENST00000611455 153 ntBASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
LIMA1Q9UHB6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AC004944.1-201ENST00000517807 3059 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 RNU1-100P-201ENST00000365255 165 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 SNORD37.1-201ENST00000390968 65 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 SNORA16.2-201ENST00000390991 127 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AL138827.1-201ENST00000402666 306 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AL590002.1-201ENST00000406554 418 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 RNU6-607P-201ENST00000411283 108 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 RPL35AP12-201ENST00000425362 338 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 PTGES3P4-201ENST00000426243 356 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 OSTCP8-201ENST00000445117 448 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AL671855.1-201ENST00000446875 1203 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AL590639.1-201ENST00000456484 337 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AC116655.1-201ENST00000508324 901 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 RNA5SP341-201ENST00000516261 117 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 Y_RNA.704-201ENST00000516851 102 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 RNU6-835P-201ENST00000516974 104 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AC068944.2-201ENST00000610373 403 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AC090517.2-201ENST00000614966 680 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 uc_338.34-201ENST00000617467 174 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 AC022418.1-201ENST00000624118 445 ntBASIC2.94□□□□□ -1.94
LIMA1Q9UHB6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 RNU1-112P-201ENST00000364401 164 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 RNU6-72P-201ENST00000384285 79 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 RNU6-434P-201ENST00000384376 107 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 RNU6-19P-201ENST00000384718 107 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 UBA52P6-201ENST00000399822 382 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 AL606923.1-201ENST00000406616 190 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 U3.37-201ENST00000408528 213 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 RNU2-3P-201ENST00000410144 191 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 CYCSP33-201ENST00000414485 327 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 snoU109.2-201ENST00000459316 135 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 AC107626.1-201ENST00000471084 183 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 GZMAP1-201ENST00000503054 631 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 HIGD1AP13-201ENST00000509878 289 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 RNU2-69P-201ENST00000516061 100 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 ZNF519P2-201ENST00000557032 169 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 AP001094.1-201ENST00000579805 193 ntBASIC2.93□□□□□ -1.94
LIMA1Q9UHB6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms