Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CNTN3Q9P232 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CNTN3Q9P232 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
CNTN3Q9P232 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CNTN3Q9P232 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNTN3Q9P232 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.58□□□□□ -1.68
CNTN3Q9P232 AC015813.6-201ENST00000624409 5808 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.58□□□□□ -1.68
CNTN3Q9P232 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.58□□□□□ -1.68
CNTN3Q9P232 AC010300.1-201ENST00000600671 5134 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 AL157777.2-201ENST00000258070 137 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 RNA5SP502-201ENST00000362694 119 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 RNU4-90P-201ENST00000362773 141 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 SNORD115-32-201ENST00000364079 82 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.58□□□□□ -1.68
CNTN3Q9P232 RNU6-17P-201ENST00000384245 107 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 RNU6-18P-201ENST00000384527 107 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 RNA5SP317-201ENST00000410176 116 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 Y_RNA.602-201ENST00000410535 92 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 RNA5SP31-201ENST00000411144 127 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 RNA5SP311-201ENST00000411290 116 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 RAB9AP3-201ENST00000412737 573 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 EIF1AXP1-201ENST00000419267 435 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.58□□□□□ -1.68
CNTN3Q9P232 Z82188.1-201ENST00000436709 154 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CNTN3Q9P232 RAB9AP1-201ENST00000449393 573 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 RNA5SP246-201ENST00000458909 119 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 TOMM22P6-201ENST00000465035 409 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
CNTN3Q9P232 RPS26P21-201ENST00000475397 348 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.58□□□□□ -1.68
CNTN3Q9P232 SERF1AP1-201ENST00000514575 187 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 RNU6-496P-201ENST00000516145 99 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 RNA5SP315-201ENST00000516340 116 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 SCARNA24.2-201ENST00000516968 130 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 RNA5SP312-201ENST00000517068 116 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 AC069240.1-201ENST00000548774 375 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 MIR3160-1-201ENST00000577972 85 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 MIR3690-201ENST00000580266 75 ntBASIC4.58□□□□□ -1.68
CNTN3Q9P232 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CNTN3Q9P232 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.58□□□□□ -1.68
CNTN3Q9P232 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNTN3Q9P232 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNTN3Q9P232 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNTN3Q9P232 RNU6-527P-201ENST00000363425 104 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 RNU6-290P-201ENST00000365212 101 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 RNU6-968P-201ENST00000384076 107 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 RNU6-937P-201ENST00000384325 106 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.57□□□□□ -1.68
CNTN3Q9P232 OR4C10P-201ENST00000434991 931 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.57□□□□□ -1.68
CNTN3Q9P232 AC009296.1-201ENST00000443146 155 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 AC016700.2-201ENST00000446011 156 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 RPL23AP75-201ENST00000491601 451 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 RNU6-703P-201ENST00000516946 107 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 IGKV2D-19-201ENST00000523346 262 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.57□□□□□ -1.68
CNTN3Q9P232 AC007224.1-201ENST00000564410 144 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 AC023824.2-201ENST00000566185 400 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.57□□□□□ -1.68
CNTN3Q9P232 SNX18P1Y-201ENST00000616231 511 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 AL138721.1-201ENST00000616756 179 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 AC127459.3-201ENST00000624328 466 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 AC048347.1-201ENST00000624621 427 ntBASIC4.57□□□□□ -1.68
CNTN3Q9P232 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.57□□□□□ -1.68
CNTN3Q9P232 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNTN3Q9P232 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNTN3Q9P232 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNTN3Q9P232 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.57□□□□□ -1.68
CNTN3Q9P232 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNTN3Q9P232 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNTN3Q9P232 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.56□□□□□ -1.68
CNTN3Q9P232 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNTN3Q9P232 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTN3Q9P232 Y_RNA.199-201ENST00000364014 102 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 RNU1-13P-201ENST00000384499 162 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 MIR1179-201ENST00000408703 91 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 AC092047.1-201ENST00000424997 240 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.56□□□□□ -1.68
CNTN3Q9P232 AL353705.4-201ENST00000449661 238 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.56□□□□□ -1.68
CNTN3Q9P232 RPL23AP49-201ENST00000492925 468 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 RN7SKP272-201ENST00000516988 232 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 AP004607.1-201ENST00000524456 203 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 LINC00933-203ENST00000559812 219 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.56□□□□□ -1.68
CNTN3Q9P232 AC010928.2-201ENST00000588017 287 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 RPL23AP88-201ENST00000605759 454 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 ZYXP1-201ENST00000617638 118 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTN3Q9P232 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.56□□□□□ -1.68
CNTN3Q9P232 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTN3Q9P232 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNTN3Q9P232 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
CNTN3Q9P232 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.56□□□□□ -1.68
CNTN3Q9P232 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CNTN3Q9P232 AC027290.2-201ENST00000623210 18662 ntBASIC4.55□□□□□ -1.68
CNTN3Q9P232 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms