Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 CR381653.2-201ENST00000624041 768 ntBASIC2.56□□□□□ -2
NLGN3Q9NZ94 SEPT14P19-203ENST00000633205 211 ntBASIC2.56□□□□□ -2
NLGN3Q9NZ94 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.56□□□□□ -2
NLGN3Q9NZ94 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.56□□□□□ -2
NLGN3Q9NZ94 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
NLGN3Q9NZ94 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.56□□□□□ -2
NLGN3Q9NZ94 SNORA70B-201ENST00000384210 135 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 RNU6-550P-201ENST00000391057 101 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 MIR1261-201ENST00000408659 82 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.55□□□□□ -2
NLGN3Q9NZ94 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.55□□□□□ -2
NLGN3Q9NZ94 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.55□□□□□ -2
NLGN3Q9NZ94 AC080125.1-201ENST00000414888 684 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 RPLP0P7-201ENST00000416050 667 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.55□□□□□ -2
NLGN3Q9NZ94 AL160275.3-201ENST00000423876 471 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 AL358075.3-201ENST00000426289 226 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 AC000111.3-201ENST00000433478 193 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 MTND3P21-201ENST00000433774 331 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 MTND1P4-201ENST00000435196 415 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 WASF1P1-201ENST00000447560 1131 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 RPL37P6-201ENST00000460682 294 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NLGN3Q9NZ94 RPL31P41-201ENST00000477967 372 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 AC126182.1-201ENST00000478134 357 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 MTCO3P9-201ENST00000506989 781 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.55□□□□□ -2
NLGN3Q9NZ94 RNA5SP24-201ENST00000516478 95 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 RNU6-314P-201ENST00000516574 104 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 RPPH1-2P-201ENST00000516688 293 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 RN7SKP219-201ENST00000516825 296 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 Y_RNA.704-201ENST00000516851 102 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 RNA5SP503-201ENST00000517047 117 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 RNU6-1315P-201ENST00000517187 99 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.55□□□□□ -2
NLGN3Q9NZ94 ELOCP31-201ENST00000540463 467 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.55□□□□□ -2
NLGN3Q9NZ94 BNIP3P30-201ENST00000601184 574 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 AP000787.2-201ENST00000604432 568 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 AC007938.3-201ENST00000604965 623 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 MIR6715A-201ENST00000615929 79 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 AC064859.1-201ENST00000624741 174 ntBASIC2.55□□□□□ -2
NLGN3Q9NZ94 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.55□□□□□ -2
NLGN3Q9NZ94 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.55□□□□□ -2
NLGN3Q9NZ94 AC006020.1-201ENST00000420179 1854 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.54□□□□□ -2
NLGN3Q9NZ94 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.54□□□□□ -2
NLGN3Q9NZ94 AL139276.1-201ENST00000311910 1001 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 RNU6-778P-201ENST00000363269 103 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.54□□□□□ -2
NLGN3Q9NZ94 MIR592-201ENST00000384959 97 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 MIR548F1-201ENST00000408667 84 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.54□□□□□ -2
NLGN3Q9NZ94 RNU2-68P-201ENST00000410878 191 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 Y_RNA.619-201ENST00000410951 90 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 ZNF885P-201ENST00000420174 1098 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.54□□□□□ -2
NLGN3Q9NZ94 MTCYBP8-201ENST00000422855 651 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 AL596276.1-201ENST00000434465 418 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.54□□□□□ -2
NLGN3Q9NZ94 RPL7P54-201ENST00000438336 674 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 AC016691.1-201ENST00000441321 413 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 MTND1P18-201ENST00000448191 573 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 AC073415.1-201ENST00000449240 153 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.54□□□□□ -2
NLGN3Q9NZ94 AC027673.1-201ENST00000456245 405 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 RNU7-63P-201ENST00000459054 62 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 SRRM1P2-201ENST00000464531 1192 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.54□□□□□ -2
NLGN3Q9NZ94 AC114786.4-201ENST00000508771 728 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 Y_RNA.693-201ENST00000516641 110 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
NLGN3Q9NZ94 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.54□□□□□ -2
NLGN3Q9NZ94 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.54□□□□□ -2
NLGN3Q9NZ94 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.54□□□□□ -2
NLGN3Q9NZ94 HMGB1P33-201ENST00000563485 527 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.54□□□□□ -2
NLGN3Q9NZ94 SNORD53-201ENST00000579969 78 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 MIR4635-201ENST00000583759 79 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 AC007621.1-201ENST00000604544 437 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 MTND4LP5-201ENST00000605152 292 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 DUSP12P1-201ENST00000612874 516 ntBASIC2.54□□□□□ -2
NLGN3Q9NZ94 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.54□□□□□ -2
NLGN3Q9NZ94 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NLGN3Q9NZ94 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
NLGN3Q9NZ94 MTND4P5-201ENST00000435821 1374 ntBASIC2.53□□□□□ -2
NLGN3Q9NZ94 RNU6-1085P-201ENST00000363576 107 ntBASIC2.53□□□□□ -2
NLGN3Q9NZ94 RNU6-517P-201ENST00000384362 110 ntBASIC2.53□□□□□ -2
NLGN3Q9NZ94 MIR578-201ENST00000384828 96 ntBASIC2.53□□□□□ -2
NLGN3Q9NZ94 MIR627-201ENST00000384979 97 ntBASIC2.53□□□□□ -2
NLGN3Q9NZ94 MIR27B-201ENST00000385129 97 ntBASIC2.53□□□□□ -2
NLGN3Q9NZ94 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.53□□□□□ -2
NLGN3Q9NZ94 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.53□□□□□ -2
NLGN3Q9NZ94 MIR888-201ENST00000401186 77 ntBASIC2.53□□□□□ -2
NLGN3Q9NZ94 RNU6-387P-201ENST00000411331 105 ntBASIC2.53□□□□□ -2
NLGN3Q9NZ94 OR6C66P-201ENST00000414917 930 ntBASIC2.53□□□□□ -2
NLGN3Q9NZ94 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.53□□□□□ -2
NLGN3Q9NZ94 GTF2IP20-201ENST00000431663 360 ntBASIC2.53□□□□□ -2
NLGN3Q9NZ94 AL121890.1-201ENST00000435457 205 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms