Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC130454.1-201ENST00000622948 401 ntBASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.51□□□□□ -1.69
CNTNAP4Q9C0A0 RNA5SP374-201ENST00000362939 125 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 SNORA51.11-201ENST00000384442 131 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 MIR578-201ENST00000384828 96 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 MIR301A-201ENST00000385261 86 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 RNU4-78P-201ENST00000410940 126 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 CYCSP33-201ENST00000414485 327 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 AC063979.1-201ENST00000415539 377 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 AC007098.1-201ENST00000420122 367 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 EIF4EP2-201ENST00000422816 654 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 AL353997.1-201ENST00000432936 108 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 NDUFB1P1-201ENST00000435191 180 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 AC104332.1-201ENST00000440471 797 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 MTND4LP30-201ENST00000454092 297 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 AC133134.1-201ENST00000466800 359 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 Y_RNA.673-201ENST00000516306 88 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 SNORA31.22-201ENST00000517204 135 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 MIR3133-201ENST00000583157 78 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 SDAD1P2-201ENST00000441308 2028 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 AC000123.3-201ENST00000624029 4975 ntBASIC4.5□□□□□ -1.69
CNTNAP4Q9C0A0 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 Y_RNA.26-201ENST00000362539 101 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 Y_RNA.183-201ENST00000363882 113 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 RNU6-882P-201ENST00000391025 103 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 AL513475.1-201ENST00000406602 315 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 RN7SKP53-201ENST00000411337 315 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 AL096701.2-201ENST00000416920 238 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 USP9YP7-201ENST00000436723 430 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 USP9YP32-201ENST00000452432 430 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 PRELID3BP1-201ENST00000457142 540 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 APOOP4-201ENST00000513530 597 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 RNU6-579P-201ENST00000516879 102 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 RNU6-111P-201ENST00000517179 105 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 IGKV2-26-201ENST00000518305 343 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 AC091144.1-201ENST00000519573 138 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 MIR5680-201ENST00000577577 84 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 MIR1273C-201ENST00000578669 77 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 MIR5004-201ENST00000579078 107 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 RAC1P9-201ENST00000604990 392 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 AL121917.1-203ENST00000605534 577 ntBASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CNTNAP4Q9C0A0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 MFSD8-233ENST00000641482 4860 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 Y_RNA.20-201ENST00000362479 113 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 Y_RNA.64-201ENST00000362845 102 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 U8.8-201ENST00000365399 135 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 Y_RNA.462-201ENST00000384268 102 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 Y_RNA.471-201ENST00000384312 102 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 SNORD73A-201ENST00000386062 65 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 PCNPP3-201ENST00000393579 471 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 MIR548H3-201ENST00000408771 118 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 RNU6-325P-201ENST00000411132 105 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 AC017079.2-201ENST00000416102 485 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 RPS20P1-201ENST00000434853 354 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 AC073587.1-201ENST00000447093 876 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 RN7SL504P-201ENST00000494496 287 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 AC113155.1-201ENST00000511141 769 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 RNU6-897P-201ENST00000517135 105 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 AC126177.3-201ENST00000551839 688 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 AC004584.2-201ENST00000570407 410 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 MIR5701-3-201ENST00000578890 82 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 MIR5701-1-201ENST00000585138 82 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 AC107294.1-201ENST00000609524 467 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 MIR5701-2-201ENST00000615634 82 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 SNORD39.4-201ENST00000620099 78 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 SDR42E1P4-201ENST00000620894 481 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 AC243829.7-201ENST00000633081 225 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 AC132825.6-201ENST00000638861 357 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 ZNF299P-201ENST00000406845 1804 ntBASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.48□□□□□ -1.69
CNTNAP4Q9C0A0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms