Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC241585.2-209ENST00000638217 143 ntBASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM55Q9BYV6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 SNORD56.1-201ENST00000362913 68 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 RNU6-490P-201ENST00000362985 107 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 RNU1-18P-201ENST00000363062 164 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 SNORA22B-201ENST00000383876 138 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 RNA5SP171-201ENST00000391071 115 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 RNU2-49P-201ENST00000410666 184 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 SETP5-201ENST00000437270 562 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 AL035666.1-201ENST00000446195 348 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 MED28P2-201ENST00000475771 317 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 RN7SL132P-201ENST00000478131 296 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 AC022447.4-201ENST00000504053 364 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 RNA5SP519-201ENST00000516480 119 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 RNU7-143P-201ENST00000516781 65 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 ACA59.2-201ENST00000517061 156 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 SNORA31.21-201ENST00000517180 77 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 AC009163.5-201ENST00000575421 637 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 AC040896.1-201ENST00000613819 479 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 AC006133.1-201ENST00000617106 264 ntBASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM55Q9BYV6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.77
TRIM55Q9BYV6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 RNA5SP130-201ENST00000364431 114 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 RNU6-692P-201ENST00000384496 107 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 Y_RNA.533-201ENST00000384596 114 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 Z98941.1-201ENST00000407764 100 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 RNA5SP36-201ENST00000410197 133 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 RN7SKP202-201ENST00000410439 330 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 AP000275.1-201ENST00000411943 390 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 AC074117.2-201ENST00000417130 397 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 EIF4EP2-201ENST00000422816 654 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 AC018865.2-201ENST00000423631 129 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 AL353997.1-201ENST00000432936 108 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 RPL23AP46-201ENST00000438548 490 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 AC243964.1-201ENST00000441814 261 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 AC068781.1-201ENST00000488231 618 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 RN7SL604P-201ENST00000492589 296 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 SNORA67.7-201ENST00000516664 135 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 RNU6-699P-201ENST00000517081 110 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 RNU6-264P-201ENST00000517134 104 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 RNU1-45P-201ENST00000517191 141 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 AL158827.2-201ENST00000602494 330 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 AP001836.1-201ENST00000604675 523 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 AC005014.2-201ENST00000607795 599 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 HMGB1P24-202ENST00000615653 685 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 AL591424.2-201ENST00000617023 128 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 AL691447.3-201ENST00000635020 330 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 MAPK10-372ENST00000641954 3413 ntBASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM55Q9BYV6 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 GABRG2-229ENST00000641017 3628 ntBASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 Y_RNA.28-201ENST00000362554 111 ntBASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 Y_RNA.162-201ENST00000363683 102 ntBASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 Y_RNA.252-201ENST00000364556 101 ntBASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 MIR23A-201ENST00000385245 73 ntBASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 MIR1251-201ENST00000408552 70 ntBASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 COX6B1P7-201ENST00000430845 235 ntBASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 RNU6-711P-201ENST00000517255 106 ntBASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 RN7SKP295-201ENST00000517264 153 ntBASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 MIR3158-1-201ENST00000583596 81 ntBASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 MIR6875-201ENST00000617506 72 ntBASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 MTND5P9-201ENST00000503854 1755 ntBASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM55Q9BYV6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms