Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 RNA5SP197-201ENST00000363357 119 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 RNA5SP354-201ENST00000391247 136 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 RAP1BP3-201ENST00000407180 549 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 USP9YP20-201ENST00000419224 558 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 TOMM20P4-201ENST00000427861 435 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 AL671855.1-201ENST00000446875 1203 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 NIPA2P5-201ENST00000452282 464 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 AC113155.1-201ENST00000511141 769 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 RNU6-1314P-201ENST00000517139 104 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 AC090136.1-201ENST00000520009 240 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 MIR5692C1-201ENST00000585309 91 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 AC020895.1-201ENST00000595362 272 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 BNIP3P10-201ENST00000605360 577 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 AL136221.1-201ENST00000621449 509 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 SCARNA4-202ENST00000625402 129 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 AC099654.14-201ENST00000638599 341 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 AC092435.3-201ENST00000565538 3654 ntBASIC2.79□□□□□ -1.96
PCGF1Q9BSM1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-37P-201ENST00000362692 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-942P-201ENST00000363002 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 Y_RNA.100-201ENST00000363141 102 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 SNORD56.3-201ENST00000363507 71 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-11P-201ENST00000364234 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-7-201ENST00000364784 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 SNORA51.4-201ENST00000364993 124 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-1280P-201ENST00000365211 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-8-201ENST00000365467 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-25P-201ENST00000383873 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-1-201ENST00000383898 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-48P-201ENST00000384161 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-36P-201ENST00000384172 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-4P-201ENST00000384205 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-5P-201ENST00000384238 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-3P-201ENST00000384314 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-16P-201ENST00000384385 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-15P-201ENST00000384534 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 Y_RNA.530-201ENST00000384587 101 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-2-201ENST00000384627 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-29P-201ENST00000384637 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-9-201ENST00000384776 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-33P-201ENST00000384793 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 MIR491-201ENST00000384877 84 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 MIR23A-201ENST00000385245 73 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 MT-TL1-201ENST00000386347 75 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-876P-201ENST00000391295 104 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNA5SP120-201ENST00000410900 112 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 Z99755.1-201ENST00000414048 380 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AC096649.2-201ENST00000416186 393 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AL353678.1-201ENST00000422735 741 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AL513185.2-201ENST00000425543 193 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 MTCO2P30-201ENST00000503662 364 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 MIR2276-201ENST00000516886 89 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 SNORD19.2-201ENST00000516978 73 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AC069113.1-201ENST00000517763 267 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 BTF3P12-201ENST00000519620 469 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AC104027.1-201ENST00000521887 300 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AP004607.1-201ENST00000524456 203 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AP000763.2-201ENST00000540641 163 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 PSMA3P-201ENST00000555485 635 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AL355877.2-201ENST00000603670 358 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AC091152.3-201ENST00000604227 325 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RNU6-6P-201ENST00000606623 107 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 RMST_7.1-201ENST00000621935 268 ntBASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.78□□□□□ -1.96
PCGF1Q9BSM1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PCGF1Q9BSM1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.77□□□□□ -1.97
PCGF1Q9BSM1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.77□□□□□ -1.97
PCGF1Q9BSM1 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.77□□□□□ -1.97
PCGF1Q9BSM1 AC138393.1-203ENST00000327086 343 ntBASIC2.77□□□□□ -1.97
PCGF1Q9BSM1 SNORA38.1-201ENST00000364172 131 ntBASIC2.77□□□□□ -1.97
PCGF1Q9BSM1 RPL21P75-201ENST00000396599 483 ntBASIC2.77□□□□□ -1.97
PCGF1Q9BSM1 RPL21P28-201ENST00000401418 483 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 1266.9 ms