Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RNU6-1317P-201ENST00000364582 104 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 RNA5SP97-201ENST00000365006 84 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 U8.8-201ENST00000365399 135 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.42□□□□□ -1.86
VRK1Q99986 RNU6-1040P-201ENST00000383974 107 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 RNU6-474P-201ENST00000384243 107 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 RNU6-198P-201ENST00000384258 104 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 Y_RNA.473-201ENST00000384333 102 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 MIR559-201ENST00000385188 96 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 RNU6ATAC-201ENST00000408749 126 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 RAB9AP3-201ENST00000412737 573 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.42□□□□□ -1.86
VRK1Q99986 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.42□□□□□ -1.86
VRK1Q99986 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.42□□□□□ -1.86
VRK1Q99986 RAB9AP1-201ENST00000449393 573 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 RN7SL542P-201ENST00000467147 294 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 RPL21P129-201ENST00000491732 478 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 AC114801.2-201ENST00000503825 781 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 AC026726.1-201ENST00000512859 601 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 ACA59.1-201ENST00000515966 143 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VRK1Q99986 AC010186.2-204ENST00000537668 439 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 CR383656.8-201ENST00000549046 145 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 AC074050.1-201ENST00000563247 211 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.42□□□□□ -1.86
VRK1Q99986 HMGN2P15-201ENST00000585707 270 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.42□□□□□ -1.86
VRK1Q99986 FP236240.3-201ENST00000623061 327 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.42□□□□□ -1.86
VRK1Q99986 CEP170P1-201ENST00000502249 4587 ntBASIC3.42□□□□□ -1.86
VRK1Q99986 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VRK1Q99986 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
VRK1Q99986 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.42□□□□□ -1.86
VRK1Q99986 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VRK1Q99986 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VRK1Q99986 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VRK1Q99986 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VRK1Q99986 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.41□□□□□ -1.86
VRK1Q99986 MTND4P27-201ENST00000450813 1354 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.41□□□□□ -1.86
VRK1Q99986 GABRG2-229ENST00000641017 3628 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VRK1Q99986 Y_RNA.2-201ENST00000362330 96 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 RNU6-428P-201ENST00000362942 107 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 Y_RNA.112-201ENST00000363250 102 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 RNU6-1059P-201ENST00000363752 98 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 RNU6-890P-201ENST00000384121 107 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 SNORA41-201ENST00000384675 132 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.41□□□□□ -1.86
VRK1Q99986 Z82205.1-201ENST00000428456 297 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 TBCAP1-201ENST00000436520 327 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 AC083863.1-201ENST00000438811 231 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 AC133134.1-201ENST00000466800 359 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 AP002884.2-201ENST00000471647 395 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.41□□□□□ -1.86
VRK1Q99986 RNU6-976P-201ENST00000516086 111 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 SCARNA15.1-201ENST00000516384 125 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 RNA5SP179-201ENST00000517284 121 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 AP003072.1-201ENST00000531740 145 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.41□□□□□ -1.86
VRK1Q99986 MIR4474-201ENST00000579189 78 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 MIR3171-201ENST00000584270 74 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.41□□□□□ -1.86
VRK1Q99986 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.41□□□□□ -1.86
VRK1Q99986 AC091167.4-201ENST00000605079 184 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 MIR92B-201ENST00000607575 96 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 MIR8076-201ENST00000611401 83 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 AL354798.1-201ENST00000622505 329 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 uc_338.22-201ENST00000622722 187 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.41□□□□□ -1.86
VRK1Q99986 AC233263.6-201ENST00000631132 1963 ntBASIC3.41□□□□□ -1.86
VRK1Q99986 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VRK1Q99986 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
VRK1Q99986 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VRK1Q99986 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
VRK1Q99986 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
VRK1Q99986 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
VRK1Q99986 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
VRK1Q99986 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.4□□□□□ -1.87
VRK1Q99986 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VRK1Q99986 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VRK1Q99986 RNU6-105P-201ENST00000363909 104 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 RNU6-336P-201ENST00000364891 107 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 AL591034.2-201ENST00000402839 359 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.4□□□□□ -1.87
VRK1Q99986 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.4□□□□□ -1.87
VRK1Q99986 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.4□□□□□ -1.87
VRK1Q99986 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.4□□□□□ -1.87
VRK1Q99986 SETP5-201ENST00000437270 562 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 AL137792.2-201ENST00000443484 235 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.4□□□□□ -1.87
VRK1Q99986 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.4□□□□□ -1.87
VRK1Q99986 AC116655.1-201ENST00000508324 901 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.4□□□□□ -1.87
VRK1Q99986 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.4□□□□□ -1.87
VRK1Q99986 AP005902.1-201ENST00000521358 186 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
VRK1Q99986 SNRPGP18-201ENST00000553000 214 ntBASIC3.4□□□□□ -1.87
VRK1Q99986 AC109446.1-201ENST00000566172 220 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms