Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL445529.1-201ENST00000398713 389 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 RNU6-293P-201ENST00000411259 106 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 AL592148.1-201ENST00000413568 445 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 AP000907.1-201ENST00000428428 510 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 AC006946.1-201ENST00000429106 328 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 MYL8P-204ENST00000431574 518 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 AL645568.3-201ENST00000433683 316 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.28□□□□□ -1.88
SNX18Q96RF0 AL583843.1-201ENST00000456070 346 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 AL135752.1-201ENST00000479477 471 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 AC011005.2-201ENST00000487324 359 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 AC010265.1-201ENST00000513509 211 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 RNU6-1282P-201ENST00000516735 96 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 AC022634.1-201ENST00000520765 532 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.28□□□□□ -1.88
SNX18Q96RF0 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.28□□□□□ -1.88
SNX18Q96RF0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.28□□□□□ -1.88
SNX18Q96RF0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.28□□□□□ -1.88
SNX18Q96RF0 AC099506.2-201ENST00000623074 221 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
SNX18Q96RF0 AC090740.1-201ENST00000623193 2262 ntBASIC3.28□□□□□ -1.88
SNX18Q96RF0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNX18Q96RF0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.27□□□□□ -1.89
SNX18Q96RF0 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNX18Q96RF0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNX18Q96RF0 RNA5SP383-201ENST00000362934 120 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 RNA5SP42-201ENST00000364278 115 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 RNU6-384P-201ENST00000364900 104 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SNX18Q96RF0 SNORA48.8-201ENST00000391324 134 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 RAB9AP3-201ENST00000412737 573 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 AC245291.1-201ENST00000419501 328 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 PGBD4P6-201ENST00000421501 610 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 TMEM167AP1-201ENST00000423409 219 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 AC007560.1-201ENST00000426912 237 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 YME1L1P1-201ENST00000429435 297 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNX18Q96RF0 AC097713.2-201ENST00000430199 356 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 RAB9AP1-201ENST00000449393 573 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 RPL21P13-201ENST00000488305 481 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 AC018437.1-201ENST00000492214 406 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 RNU1-61P-201ENST00000516107 151 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 SNORA31.19-201ENST00000517079 126 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.27□□□□□ -1.89
SNX18Q96RF0 HMGB1P14-201ENST00000557424 591 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 AC087499.8-201ENST00000578406 226 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 AL355802.3-201ENST00000607571 545 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 AC011890.2-201ENST00000613393 294 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.27□□□□□ -1.89
SNX18Q96RF0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.27□□□□□ -1.89
SNX18Q96RF0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNX18Q96RF0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNX18Q96RF0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.27□□□□□ -1.89
SNX18Q96RF0 AC073073.2-201ENST00000609827 2578 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNX18Q96RF0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SNX18Q96RF0 MFSD8-233ENST00000641482 4860 ntBASIC3.27□□□□□ -1.89
SNX18Q96RF0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SNX18Q96RF0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SNX18Q96RF0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SNX18Q96RF0 MIR148B-201ENST00000362252 99 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 Y_RNA.2-201ENST00000362330 96 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 RNU6-1115P-201ENST00000362490 106 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 Y_RNA.28-201ENST00000362554 111 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 Y_RNA.112-201ENST00000363250 102 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 RNU6-331P-201ENST00000384724 107 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 MIR449B-201ENST00000384995 97 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 MIR517A-201ENST00000385001 87 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 U3.39-201ENST00000408569 239 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 Y_RNA.623-201ENST00000411128 95 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 SNORD5.1-201ENST00000458800 75 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 HMGN1P11-201ENST00000508668 303 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 MIR3944-201ENST00000581277 108 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 AC011494.1-201ENST00000596454 237 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 AC007938.3-201ENST00000604965 623 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 AL160281.1-201ENST00000605307 311 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 PLCE1P1-201ENST00000622094 305 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 AC027309.3-201ENST00000623419 351 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 AL034408.1-202ENST00000636088 415 ntBASIC3.26□□□□□ -1.89
SNX18Q96RF0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SNX18Q96RF0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SNX18Q96RF0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SNX18Q96RF0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX18Q96RF0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms