| BBC3 | Q96PG8 | CCDC110-202 | ENST00000393540 | 2722 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AL672167.1-204 | ENST00000641875 | 3017 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AGTPBP1-205 | ENST00000376083 | 4208 nt | APPRIS P1 TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | TANK-201 | ENST00000259075 | 2152 nt | APPRIS P1 TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | MCF2-208 | ENST00000519895 | 3346 nt | APPRIS ALT2 TSL 2 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | TUG1-201 | ENST00000519077 | 5673 nt | TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC007685.1-201 | ENST00000329806 | 452 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | Y_RNA.297-201 | ENST00000364950 | 91 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNU6-611P-201 | ENST00000384276 | 104 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNU6-886P-201 | ENST00000384319 | 105 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | MIR199A2-201 | ENST00000385289 | 110 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | TRAJ18-201 | ENST00000390519 | 66 nt | APPRIS P1 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | MIR548I2-201 | ENST00000408348 | 149 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNU2-33P-201 | ENST00000410344 | 192 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNU2-25P-201 | ENST00000411041 | 191 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AP000275.1-201 | ENST00000411943 | 390 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | UBE2D3P2-201 | ENST00000424409 | 445 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AL157937.1-201 | ENST00000435092 | 443 nt | TSL 3 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC083863.1-201 | ENST00000438811 | 231 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC092059.1-201 | ENST00000485347 | 429 nt | TSL 3 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC097501.2-201 | ENST00000502668 | 305 nt | TSL 5 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | HMGB3P16-201 | ENST00000508037 | 287 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC008871.1-201 | ENST00000510935 | 398 nt | TSL 3 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC008716.1-201 | ENST00000511084 | 513 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | NDUFB4P9-201 | ENST00000511646 | 388 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNA5SP164-201 | ENST00000516533 | 110 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC090568.2-205 | ENST00000518631 | 576 nt | TSL 4 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC034114.1-201 | ENST00000520293 | 285 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AL356133.2-201 | ENST00000521572 | 371 nt | TSL 3 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | SNHG1-219 | ENST00000542112 | 780 nt | TSL 3 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC215217.1-201 | ENST00000562162 | 347 nt | TSL 3 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | MIR5004-201 | ENST00000579078 | 107 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | LRRC37A5P-203 | ENST00000580181 | 585 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | DLEU2_2.2-201 | ENST00000615474 | 90 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | SNORD39.4-201 | ENST00000620099 | 78 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | C4orf22-209 | ENST00000621014 | 228 nt | TSL 3 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | LINC02246-205 | ENST00000627623 | 417 nt | TSL 5 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | CYP3A43-217 | ENST00000631161 | 328 nt | TSL 5 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | GABRG2-214 | ENST00000639111 | 11735 nt | APPRIS P1 TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | LINC01689-201 | ENST00000416218 | 2007 nt | TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | GPRC6A-203 | ENST00000530250 | 2310 nt | TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | IQCH-206 | ENST00000546225 | 3112 nt | TSL 5 BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | SYT16-205 | ENST00000568344 | 13978 nt | APPRIS P1 TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | SLC44A5-201 | ENST00000370855 | 4406 nt | APPRIS P3 TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | SYT14-204 | ENST00000472886 | 2966 nt | APPRIS P3 TSL 1 (best) BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | LRIT3-202 | ENST00000594814 | 3566 nt | APPRIS P1 TSL 5 BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | OR10D3-203 | ENST00000641546 | 3566 nt | APPRIS P1 BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RWDD2B-207 | ENST00000493196 | 3094 nt | APPRIS P1 TSL 1 (best) BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | FAM214A-204 | ENST00000546305 | 3697 nt | TSL 2 BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | BBX-203 | ENST00000402543 | 3980 nt | TSL 5 BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | LIPI-203 | ENST00000536861 | 1529 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | Y_RNA.84-201 | ENST00000363011 | 104 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | Y_RNA.183-201 | ENST00000363882 | 113 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNY1-201 | ENST00000364228 | 113 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNU6-187P-201 | ENST00000384139 | 106 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNU6-1203P-201 | ENST00000410703 | 110 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNU6-130P-201 | ENST00000411112 | 103 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNU6-325P-201 | ENST00000411132 | 105 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNU6-607P-201 | ENST00000411283 | 108 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC245052.1-201 | ENST00000426213 | 410 nt | TSL 3 BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RPEP5-201 | ENST00000441137 | 268 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | LINC02264-201 | ENST00000442020 | 576 nt | TSL 3 BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | snoU13.4-201 | ENST00000458916 | 104 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AL359273.1-201 | ENST00000510918 | 627 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC113155.1-201 | ENST00000511141 | 769 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNU6-911P-201 | ENST00000516523 | 104 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNU6-1256P-201 | ENST00000516539 | 103 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | EGLN3-AS1-201 | ENST00000555922 | 308 nt | TSL 3 BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AL157871.3-201 | ENST00000557231 | 293 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | MED28P6-201 | ENST00000558776 | 231 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | MIR4276-201 | ENST00000584832 | 70 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC073410.2-201 | ENST00000603240 | 332 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AL161798.1-201 | ENST00000604630 | 131 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AP002826.1-201 | ENST00000608835 | 315 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AL161782.1-201 | ENST00000622930 | 586 nt | TSL 3 BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | CCNYL2-203 | ENST00000638057 | 730 nt | TSL 3 BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | SLC44A5-202 | ENST00000370859 | 3896 nt | APPRIS ALT2 TSL 2 BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC139713.2-215 | ENST00000641428 | 5037 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | SEC23A-202 | ENST00000537403 | 4215 nt | TSL 2 BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | PKHD1-202 | ENST00000371117 | 16282 nt | APPRIS P4 TSL 1 (best) BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | AC126323.6-202 | ENST00000568092 | 3511 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | PCDH15-214 | ENST00000395446 | 3948 nt | TSL 5 BASIC | 3.36 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | HMGN5-201 | ENST00000358130 | 2126 nt | APPRIS P2 TSL 2 BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RBBP6-202 | ENST00000348022 | 5739 nt | TSL 1 (best) BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | CNTN5-212 | ENST00000619298 | 5734 nt | TSL 5 BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | ZNF562-201 | ENST00000293648 | 12380 nt | TSL 2 BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | ZNF382-203 | ENST00000435416 | 3865 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | POU2F1-206 | ENST00000429375 | 13651 nt | APPRIS ALT2 TSL 2 BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | UTP20-201 | ENST00000261637 | 9025 nt | APPRIS P1 TSL 1 (best) BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | ELAVL4-203 | ENST00000371821 | 3349 nt | TSL 5 BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RBBP6-203 | ENST00000381039 | 3384 nt | TSL 1 (best) BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | CCDC178-204 | ENST00000403303 | 3354 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | SEMA3D-201 | ENST00000284136 | 6265 nt | APPRIS P1 TSL 5 BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | FLJ46284-201 | ENST00000504861 | 3421 nt | TSL 2 BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | MT-CO2-201 | ENST00000361739 | 684 nt | APPRIS P1 BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | Y_RNA.33-201 | ENST00000362591 | 102 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | Y_RNA.324-201 | ENST00000365165 | 102 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNU6-395P-201 | ENST00000365662 | 106 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | RNU6-662P-201 | ENST00000384253 | 104 nt | BASIC | 3.35 | □□□□□ -1.87 | | |
| BBC3 | Q96PG8 | MIR628-201 | ENST00000385229 | 95 nt | BASIC | 3.35 | □□□□□ -1.87 | | |