Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 RNU6-278P-201ENST00000390945 109 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 AL627390.1-201ENST00000396055 340 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 MIR1302-8-201ENST00000408342 128 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 AC016831.2-201ENST00000417179 352 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 TXNL1P1-201ENST00000429528 554 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 BTF3P15-201ENST00000455606 336 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 RPL31P58-201ENST00000469001 379 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 AC109445.1-201ENST00000512356 383 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 COPS8P3-201ENST00000526024 482 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 AC087276.1-201ENST00000529659 480 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 AP000907.2-201ENST00000530827 353 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 AL356596.1-201ENST00000624230 379 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 AC091965.5-201ENST00000624785 342 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 AC017037.3-201ENST00000625016 472 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 AC106858.1-201ENST00000637497 429 ntBASIC1.04□□□□□ -2.24
MBD3L1Q8WWY6 ZNF72P-201ENST00000425869 1908 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 RNU6-462P-201ENST00000362659 105 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 SMIM11P1-201ENST00000369586 178 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 SNORA75B-201ENST00000384053 137 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 Y_RNA.534-201ENST00000384599 112 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 RNU6-1257P-201ENST00000384625 110 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 RNU1-78P-201ENST00000391248 165 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 SNORA40C-201ENST00000391285 128 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AL513185.2-201ENST00000425543 193 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 MTND1P3-201ENST00000484956 952 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AC016550.1-201ENST00000505348 785 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AC117522.2-201ENST00000510049 657 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AC008549.1-201ENST00000512900 643 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AC136619.2-201ENST00000563361 631 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AC023813.2-201ENST00000564321 469 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AC093249.1-201ENST00000567049 203 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 BCRP9-201ENST00000605312 388 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AC130324.3-201ENST00000614165 542 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AL590808.1-201ENST00000618696 141 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AC064859.1-201ENST00000624741 174 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AL512643.1-201ENST00000635735 524 ntBASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.03□□□□□ -2.24
MBD3L1Q8WWY6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
MBD3L1Q8WWY6 RNU5E-1-201ENST00000362477 120 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 RNU6-433P-201ENST00000363216 104 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 RNU6-529P-201ENST00000363383 104 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 RNU4-13P-201ENST00000364019 141 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 RNU5A-8P-201ENST00000364102 114 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 SNORA67.6-201ENST00000391093 99 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 RNA5SP100-201ENST00000410903 110 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 RNA5SP59-201ENST00000410922 110 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 RNU2-41P-201ENST00000410991 178 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 RN7SKP192-201ENST00000411291 327 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 PIGPP2-201ENST00000411569 458 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 AC092809.3-201ENST00000415453 231 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 TIMM9P1-201ENST00000436122 256 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 LARP1BP3-201ENST00000437229 869 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 RNU6-143P-201ENST00000516942 93 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 AP005660.1-201ENST00000522972 293 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 RPS3AP4-201ENST00000555161 764 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 AC009712.1-201ENST00000564938 316 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 SNORD53B-201ENST00000577887 78 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 AC087045.1-201ENST00000605856 382 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 AC021755.4-201ENST00000616620 456 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 AC009269.6-201ENST00000621778 588 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 AL138960.2-201ENST00000625145 535 ntBASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.02□□□□□ -2.25
MBD3L1Q8WWY6 RBBP8P1-201ENST00000449447 1844 ntBASIC1.01□□□□□ -2.25
MBD3L1Q8WWY6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.01□□□□□ -2.25
MBD3L1Q8WWY6 TEX21P-201ENST00000447107 1476 ntBASIC1.01□□□□□ -2.25
MBD3L1Q8WWY6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MBD3L1Q8WWY6 AC138393.1-203ENST00000327086 343 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms