Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCHCR1Q8TD31 MTCO1P12-201ENST00000414273 1543 ntBASIC3.65□□□□□ -1.83
CCHCR1Q8TD31 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 Y_RNA.197-201ENST00000364004 102 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 MIR200C-201ENST00000384980 68 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 MIR559-201ENST00000385188 96 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 SNORD73A-201ENST00000386062 65 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 SNORA75.4-201ENST00000391278 119 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 RNU6-293P-201ENST00000411259 106 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 ATP5A1P2-201ENST00000412323 255 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 AC093578.1-201ENST00000415219 368 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 Z82205.1-201ENST00000428456 297 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 AC092798.1-201ENST00000458542 409 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 SNORD105B-201ENST00000458770 79 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 Y_RNA.631-201ENST00000459607 101 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 RNU6-572P-201ENST00000516724 80 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 Y_RNA.708-201ENST00000516950 96 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 AC107934.2-201ENST00000518653 310 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 AC007991.1-201ENST00000522680 631 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 ELOCP31-201ENST00000540463 467 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 AC027309.3-201ENST00000623419 351 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 AC244517.12-201ENST00000623581 663 ntBASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.64□□□□□ -1.83
CCHCR1Q8TD31 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 Y_RNA.132-201ENST00000363421 102 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 RNA5SP51-201ENST00000364750 119 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 RNU6-692P-201ENST00000384496 107 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 RNU6-1050P-201ENST00000410388 107 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 Y_RNA.646-201ENST00000410980 101 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 RN7SKP53-201ENST00000411337 315 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 RAB9AP3-201ENST00000412737 573 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 Z99755.1-201ENST00000414048 380 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 AC098614.2-201ENST00000426040 255 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 AL078601.1-201ENST00000444542 271 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 RAB9AP1-201ENST00000449393 573 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 RPL30P15-201ENST00000457129 321 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 RNU7-187P-201ENST00000458985 68 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 AC097473.1-201ENST00000508142 408 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 Y_RNA.670-201ENST00000516255 105 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 AC104576.1-201ENST00000524225 88 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 AP000787.2-201ENST00000604432 568 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 PART1_1.1-201ENST00000611761 217 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 U2.21-201ENST00000637295 81 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 MTND4P27-201ENST00000450813 1354 ntBASIC3.63□□□□□ -1.83
CCHCR1Q8TD31 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 MTND5P19-201ENST00000424872 1794 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 SNORA5A-201ENST00000384111 134 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 Y_RNA.594-201ENST00000410373 140 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 SNORD56-201ENST00000413522 71 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 RPL23AP82-202ENST00000427528 469 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 SSXP4-201ENST00000451349 245 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 CENPBD1P1-201ENST00000464061 469 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 MTND4LP22-201ENST00000508209 276 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 RNU1-61P-201ENST00000516107 151 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 SNORA64.4-201ENST00000516632 81 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 RNU6-1213P-201ENST00000517075 94 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 BNIP3P22-201ENST00000593399 556 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 AC078795.3-201ENST00000602913 472 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 AC009229.3-201ENST00000608056 282 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 AC133104.2-201ENST00000615272 193 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.62□□□□□ -1.83
CCHCR1Q8TD31 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms