Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC026371.1-201ENST00000551867 419 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 H3F3AP1-201ENST00000559984 334 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AL162713.1-201ENST00000604480 262 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 NUTF2P8-201ENST00000604593 363 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AC004805.2-201ENST00000605382 482 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AL110115.1-201ENST00000614396 364 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 RMST_4.1-201ENST00000616886 107 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AC126177.8-201ENST00000618339 1015 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 AC099506.2-201ENST00000623074 221 ntBASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMC1BQ8NDV3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
SMC1BQ8NDV3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 RNA5SP197-201ENST00000363357 119 ntBASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 Y_RNA.315-201ENST00000365117 102 ntBASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 AL356057.2-201ENST00000403318 432 ntBASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 RPS15AP6-201ENST00000420703 385 ntBASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 RPS29P31-201ENST00000446147 164 ntBASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 HMGN2P16-201ENST00000456802 261 ntBASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 SNORD19B-201ENST00000459623 84 ntBASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 Y_RNA.701-201ENST00000516812 110 ntBASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 CBX3P7-201ENST00000532876 502 ntBASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 AC025423.5-201ENST00000550230 219 ntBASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 FRG2DP-202ENST00000566967 323 ntBASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 AL133255.1-201ENST00000606374 441 ntBASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 AC012531.5-201ENST00000611375 151 ntBASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.02□□□□□ -1.77
SMC1BQ8NDV3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AC010733.2-201ENST00000589496 5702 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 Y_RNA.259-201ENST00000364619 101 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 Y_RNA.324-201ENST00000365165 102 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 RNU6-140P-201ENST00000384566 108 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 RNU2-3P-201ENST00000410144 191 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 CYCSP33-201ENST00000414485 327 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 FABP5P14-201ENST00000437273 393 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AC130509.1-201ENST00000464158 433 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AC084357.1-201ENST00000473404 255 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 RNU6-579P-201ENST00000516879 102 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AC025755.1-201ENST00000521306 278 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AC100830.2-201ENST00000581636 240 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AL670379.10-201ENST00000604330 253 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AL670379.9-201ENST00000605428 253 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 RNU6-85P-201ENST00000605989 107 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 AC010378.1-201ENST00000619270 362 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 OTUD4P1-201ENST00000237841 3067 ntBASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SMC1BQ8NDV3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
SMC1BQ8NDV3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 RNU6-328P-201ENST00000390887 106 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4□□□□□ -1.77
SMC1BQ8NDV3 MYL8P-204ENST00000431574 518 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 AC007677.1-201ENST00000445757 515 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 NDUFB1P2-201ENST00000449477 176 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4□□□□□ -1.77
SMC1BQ8NDV3 AC011005.2-201ENST00000487324 359 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4□□□□□ -1.77
SMC1BQ8NDV3 AC096745.1-201ENST00000509945 370 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 CASP1P1-201ENST00000526345 212 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4□□□□□ -1.77
SMC1BQ8NDV3 IMMP1LP2-201ENST00000552954 492 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 MIR5047-201ENST00000579212 100 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4□□□□□ -1.77
SMC1BQ8NDV3 ELOCP29-201ENST00000588193 334 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 OR1M4P-201ENST00000589199 287 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 AL645944.1-201ENST00000603857 493 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 RNVU1-4-201ENST00000612985 164 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4□□□□□ -1.77
SMC1BQ8NDV3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SMC1BQ8NDV3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4□□□□□ -1.77
SMC1BQ8NDV3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SMC1BQ8NDV3 CUL1P1-201ENST00000509510 2425 ntBASIC4□□□□□ -1.77
SMC1BQ8NDV3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SMC1BQ8NDV3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMC1BQ8NDV3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.99□□□□□ -1.77
SMC1BQ8NDV3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMC1BQ8NDV3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMC1BQ8NDV3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SMC1BQ8NDV3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SMC1BQ8NDV3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SMC1BQ8NDV3 AC138393.1-203ENST00000327086 343 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms