Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 AC058791.1-201ENST00000608412 3198 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 SET-203ENST00000372688 801 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-214P-201ENST00000384130 107 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-356P-201ENST00000384140 107 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 RNU2-3P-201ENST00000410144 191 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 AC017079.2-201ENST00000416102 485 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 UBE2V1P4-201ENST00000425374 344 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 AC093151.1-201ENST00000427711 313 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 RPL37P6-201ENST00000460682 294 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 RPL27AP5-201ENST00000469428 449 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 RPL31P60-201ENST00000478450 367 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 RPL21P13-201ENST00000488305 481 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 SUMO2P6-201ENST00000505273 288 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 AC022493.2-201ENST00000506122 481 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-579P-201ENST00000516879 102 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 SNRPGP16-201ENST00000533275 226 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 PRR13P7-201ENST00000605538 430 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 AC006065.5-201ENST00000623427 349 ntBASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SLC44A3Q8N4M1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 OTUD4P1-201ENST00000237841 3067 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-1318P-201ENST00000365389 103 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-1329P-201ENST00000365664 107 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-784P-201ENST00000384330 106 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 SNORA41-201ENST00000384675 132 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-55P-201ENST00000411092 107 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-607P-201ENST00000411283 108 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 CYCSP33-201ENST00000414485 327 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 RPL21P90-201ENST00000415692 466 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 HMGB3P30-201ENST00000457863 606 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 RN7SL283P-201ENST00000489055 303 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 MTND3P25-201ENST00000509243 135 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-927P-201ENST00000516199 100 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 RNA5SP341-201ENST00000516261 117 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 RN7SKP209-201ENST00000516888 304 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 GNAI2P1-201ENST00000541815 315 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 MIR4276-201ENST00000584832 70 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 SNORD58B-201ENST00000607313 66 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 AC090425.1-201ENST00000610007 140 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 AC005592.1-201ENST00000566527 1640 ntBASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.55□□□□□ -1.84
SLC44A3Q8N4M1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 SNORA80A-201ENST00000363922 136 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-702P-201ENST00000364982 107 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 Y_RNA.574-201ENST00000384766 95 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-293P-201ENST00000411259 106 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 MRPS18CP6-201ENST00000423587 223 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 AC096644.2-201ENST00000429278 159 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 CBX3P6-201ENST00000430257 527 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 AL158071.1-201ENST00000430315 461 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 AL121871.1-201ENST00000443413 436 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 U8.20-201ENST00000459445 131 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 RPL9P32-201ENST00000464118 620 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 AC015911.1-201ENST00000495111 156 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 AC110794.1-201ENST00000505816 425 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-475P-201ENST00000516073 104 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 RNU4-77P-201ENST00000516692 156 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 RNU6-840P-201ENST00000517275 65 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 AC023442.1-201ENST00000531247 422 ntBASIC3.54□□□□□ -1.84
SLC44A3Q8N4M1 AL161670.1-201ENST00000554348 137 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms