Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 AL133412.1-201ENST00000380194 2992 ntBASIC4.65□□□□□ -1.67
DEPDC4Q8N2C3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 DHX9P1-201ENST00000436565 3076 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 Y_RNA.233-201ENST00000364407 101 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 RNU1-43P-201ENST00000365052 165 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 RNU6-918P-201ENST00000391219 106 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 MIR548I2-201ENST00000408348 149 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 RN7SKP53-201ENST00000411337 315 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 ELOCP19-201ENST00000411919 318 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 FTH1P6-201ENST00000430768 320 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 AL049745.1-201ENST00000433953 286 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 AP001324.2-201ENST00000461163 319 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 RNU6-1278P-201ENST00000516130 107 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 AC005868.1-201ENST00000536421 331 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 MIR3136-201ENST00000583498 78 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 RN7SL52P-201ENST00000584271 284 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 AL357075.2-201ENST00000614906 189 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 AC100827.5-201ENST00000615883 426 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 MIR3199-2-201ENST00000636243 86 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 RBBP8P1-201ENST00000449447 1844 ntBASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
DEPDC4Q8N2C3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 MTND5P35-201ENST00000557537 1720 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 Y_RNA.179-201ENST00000363844 90 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 RN7SKP113-201ENST00000363891 295 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 Y_RNA.217-201ENST00000364214 105 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 SNORA2.3-201ENST00000383920 135 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 RNU6-493P-201ENST00000391321 108 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AL645733.1-201ENST00000402250 217 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 RPL23AP26-201ENST00000412728 464 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 TBCAP2-201ENST00000416175 326 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AC019205.3-201ENST00000424573 156 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AL590762.4-201ENST00000425885 253 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 UQCRBP2-201ENST00000447827 297 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 MRPS10P1-201ENST00000448483 130 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 Y_RNA.641-201ENST00000459414 105 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 RN7SL808P-201ENST00000496066 299 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 SNRPCP2-201ENST00000504370 475 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AC074198.2-201ENST00000508153 258 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AC006445.2-201ENST00000510061 472 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 RN7SKP66-201ENST00000516681 231 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AL110118.1-201ENST00000553543 400 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 RPL10P14-201ENST00000565265 298 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 RN7SL176P-201ENST00000580352 264 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AL078605.1-201ENST00000603529 500 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AC005520.5-201ENST00000613926 164 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AC106871.1-201ENST00000568324 3102 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 AC099654.7-201ENST00000635788 2127 ntBASIC4.63□□□□□ -1.67
DEPDC4Q8N2C3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 AC010300.1-201ENST00000600671 5134 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 SNORA17.1-201ENST00000362945 126 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 U3.3-201ENST00000362986 216 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 MIR600-201ENST00000385007 98 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 MTCO2P33-201ENST00000402100 465 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 CKS1BP6-201ENST00000424932 240 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 AC005154.2-201ENST00000438110 379 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 RPS26P2-201ENST00000440331 348 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 RNU6-625P-201ENST00000459412 107 ntBASIC4.62□□□□□ -1.67
DEPDC4Q8N2C3 AC108751.2-201ENST00000469993 231 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms