Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 OR51H2P-202ENST00000641424 3046 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 SNORD115-8-201ENST00000363856 82 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 SNORD115-38-201ENST00000365037 82 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 RNU6-178P-201ENST00000384631 104 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 U3.37-201ENST00000408528 213 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 RNU6-1199P-201ENST00000411249 104 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 AL138785.1-201ENST00000425821 331 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 AL358075.3-201ENST00000426289 226 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 AC016831.4-201ENST00000438302 307 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 AC016925.1-201ENST00000458303 298 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 RNU6-625P-201ENST00000459412 107 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 AC107027.2-201ENST00000512197 115 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 SNORD116-26-201ENST00000516006 96 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 AL110118.1-201ENST00000553543 400 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 AC105129.1-201ENST00000560250 297 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 AC136624.4-201ENST00000573044 370 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 AC010999.1-201ENST00000611856 324 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 TUG1_4.1-201ENST00000619464 181 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 MIR6810-201ENST00000622701 70 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 U6.99-201ENST00000637524 83 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 AC093535.2-201ENST00000624769 2326 ntBASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LYSMD3Q7Z3D4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
LYSMD3Q7Z3D4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 AC079741.1-201ENST00000321498 212 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 RNU1-94P-201ENST00000362627 173 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-429P-201ENST00000384582 108 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 RPL23AP95-201ENST00000426806 265 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 AC092017.2-201ENST00000427600 362 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 RPL23AP58-201ENST00000440453 469 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 AC073264.2-201ENST00000448886 166 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 AL121594.1-201ENST00000475906 575 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 KC877373.1-201ENST00000479066 408 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 AC008897.1-201ENST00000494006 347 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 MLLT10P2-201ENST00000506434 249 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-155P-201ENST00000516347 100 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-659P-201ENST00000516454 104 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 AP006289.1-201ENST00000538089 277 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 AL670379.2-201ENST00000604983 252 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 AC004467.1-201ENST00000615678 330 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 AP000346.3-201ENST00000622821 210 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 CUL1P1-201ENST00000509510 2425 ntBASIC4.71□□□□□ -1.66
LYSMD3Q7Z3D4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 ZFRP1-201ENST00000457579 2970 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 AC000123.3-201ENST00000624029 4975 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-873P-201ENST00000363833 107 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 Y_RNA.563-201ENST00000384707 108 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 SNORD96B-201ENST00000386148 79 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-578P-201ENST00000390980 103 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 RNU6-1248P-201ENST00000391096 64 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 AL592291.1-201ENST00000403830 352 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 RNA5SP146-201ENST00000410743 123 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 NDUFB4P7-201ENST00000423198 363 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 AL589765.3-201ENST00000446084 462 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 H2AFZP5-201ENST00000446960 382 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 AL591623.2-201ENST00000449978 222 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 AL451050.1-201ENST00000450126 415 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 AP004607.1-201ENST00000524456 203 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 AL161713.1-201ENST00000555538 145 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 MIR4744-201ENST00000581563 82 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 AC091979.2-201ENST00000607514 214 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 Y_RNA.802-201ENST00000614892 130 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 AC091932.3-201ENST00000624223 323 ntBASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
LYSMD3Q7Z3D4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms