Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC073415.1-201ENST00000449240 153 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 FDX1P2-201ENST00000450769 375 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AL583843.1-201ENST00000456070 346 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AC083798.1-201ENST00000472671 131 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AP004217.1-201ENST00000480579 346 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AL163973.1-201ENST00000484753 577 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AC019235.1-201ENST00000503847 207 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AC234778.2-201ENST00000566241 354 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 MIR4446-201ENST00000578505 67 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 MIR5194-201ENST00000582634 120 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 MIR4765-201ENST00000585007 77 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AL645944.1-201ENST00000603857 493 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 HMGB1P24-202ENST00000615653 685 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AL354950.2-201ENST00000617939 290 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 CDC27P3-201ENST00000635418 1910 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 AC093536.2-201ENST00000565257 1406 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.67□□□□□ -1.98
NUP54Q7Z3B4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 RNU1-35P-201ENST00000362782 153 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 RNU6-552P-201ENST00000362869 119 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 RNA5SP393-201ENST00000363423 117 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 RNU6-1179P-201ENST00000384667 107 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 MIR524-201ENST00000385242 87 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 RNU6-220P-201ENST00000390919 107 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 RNU6-1328P-201ENST00000410938 106 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 Z92545.1-201ENST00000411782 234 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 PTGES3P4-201ENST00000426243 356 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 RPL7P54-201ENST00000438336 674 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 AC016691.1-201ENST00000441321 413 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 RNU6-261P-201ENST00000459506 102 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 AC009646.1-201ENST00000510455 318 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 LRRC34P2-201ENST00000514850 553 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 RNA5SP112-201ENST00000515937 99 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 Y_RNA.693-201ENST00000516641 110 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 SCARNA13-201ENST00000516672 275 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 AC010186.2-204ENST00000537668 439 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 AL512310.1-201ENST00000548639 172 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 MIR4658-201ENST00000584344 65 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 AL021997.1-201ENST00000605757 193 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 AC012557.2-201ENST00000605919 418 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 AC069294.1-201ENST00000608397 350 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 Z82195.2-201ENST00000612348 18351 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 AL359854.1-201ENST00000614203 1594 ntBASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NUP54Q7Z3B4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.98
NUP54Q7Z3B4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.65□□□□□ -1.98
NUP54Q7Z3B4 SNORD3E-201ENST00000362899 217 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 RNU6-486P-201ENST00000363116 107 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 SNORD14B-201ENST00000364533 90 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 Y_RNA.255-201ENST00000364581 97 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 RNU6-715P-201ENST00000365204 103 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 MIR518D-201ENST00000385014 87 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 AL096701.2-201ENST00000416920 238 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 AL353621.1-201ENST00000418219 243 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 MTCYBP8-201ENST00000422855 651 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 RPS29P6-201ENST00000438196 145 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 CACYBPP2-201ENST00000453625 678 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 SNRPFP3-201ENST00000457792 225 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 AP000852.1-201ENST00000472460 573 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 RPL9P33-201ENST00000484311 566 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 HMGB1P30-201ENST00000492455 606 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 RPL22P13-201ENST00000493291 347 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 FAM92A1P2-202ENST00000504766 877 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 AC016957.1-201ENST00000534895 309 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 AL121821.2-201ENST00000556081 394 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 MIR5571-201ENST00000577998 113 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 BNIP3P30-201ENST00000601184 574 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 AC007621.1-201ENST00000604544 437 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 AC087045.1-201ENST00000605856 382 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 AC092954.2-201ENST00000609103 430 ntBASIC2.65□□□□□ -1.99
NUP54Q7Z3B4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms