Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
NIPAL1Q6NVV3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 RNU6-1284P-201ENST00000363701 100 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 RNU6-769P-201ENST00000384407 104 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 MIR29C-201ENST00000385231 88 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 AC007098.1-201ENST00000420122 367 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 MTATP6P14-201ENST00000455189 673 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 BTF3P15-201ENST00000455606 336 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 AC006512.1-201ENST00000468816 291 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 AP004607.1-201ENST00000524456 203 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 AL358072.1-201ENST00000604156 575 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 AC021646.1-201ENST00000605469 484 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 NDUFA8P1-201ENST00000605525 367 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 AC107952.2-201ENST00000606048 486 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 AC097468.3-201ENST00000607956 456 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 AC090970.3-201ENST00000612566 866 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 AC099654.9-201ENST00000637055 678 ntBASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
NIPAL1Q6NVV3 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 RNU6-288P-201ENST00000363690 104 ntBASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 RNU4-92P-201ENST00000363783 136 ntBASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 RNU6-1176P-201ENST00000390955 107 ntBASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 SNORA67.6-201ENST00000391093 99 ntBASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 RNA5SP465-201ENST00000391195 109 ntBASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 CISD1P1-201ENST00000393907 327 ntBASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 AL513185.2-201ENST00000425543 193 ntBASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 AMD1P1-201ENST00000457220 922 ntBASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 AC008834.1-201ENST00000511612 175 ntBASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 RPS3AP4-201ENST00000555161 764 ntBASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 AL592221.1-201ENST00000605266 382 ntBASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 AL355472.4-201ENST00000610233 626 ntBASIC1.48□□□□□ -2.17
NIPAL1Q6NVV3 SNORD115-3-201ENST00000363100 82 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 RNU6-898P-201ENST00000365627 104 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 RNU1-57P-201ENST00000384491 166 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 RNU6-1242P-201ENST00000391052 103 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 EIF4EP2-201ENST00000422816 654 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 SNORD13-201ENST00000459299 104 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 RNA5SP57-201ENST00000459463 123 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 AC027575.1-201ENST00000481064 460 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 RNU6-667P-201ENST00000517186 102 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 RNU6-586P-201ENST00000517265 104 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 AC009902.1-201ENST00000519351 183 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 DEFB108A-201ENST00000530110 222 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 ARL2BPP2-201ENST00000550907 489 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 MIR4285-201ENST00000581001 85 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 MIR544B-201ENST00000582372 78 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 AC009977.1-201ENST00000586015 570 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 RPL30P11-203ENST00000598995 310 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 BNIP3P9-201ENST00000603714 553 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 AC092125.1-201ENST00000562568 1995 ntBASIC1.47□□□□□ -2.17
NIPAL1Q6NVV3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 RNU1-17P-201ENST00000363022 152 ntBASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 SNORD114-19-201ENST00000363072 75 ntBASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 RNU5A-8P-201ENST00000364102 114 ntBASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 RNU4-68P-201ENST00000364314 141 ntBASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 MIR122-201ENST00000385044 85 ntBASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 MIR764-201ENST00000390811 85 ntBASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 MIR934-201ENST00000401241 83 ntBASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
NIPAL1Q6NVV3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms