Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 CR383656.8-201ENST00000549046 145 ntBASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 MIR3145-201ENST00000580727 82 ntBASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 MIR8059-201ENST00000620427 81 ntBASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 U2.21-201ENST00000637295 81 ntBASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
PRPF38BQ5VTL8 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.15□□□□□ -1.58
PRPF38BQ5VTL8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
PRPF38BQ5VTL8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.15□□□□□ -1.58
PRPF38BQ5VTL8 RNA5SP197-201ENST00000363357 119 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 RNU6-44P-201ENST00000384045 107 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 RNU6-217P-201ENST00000384164 104 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 Y_RNA.488-201ENST00000384403 102 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 Y_RNA.498-201ENST00000384460 102 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 Y_RNA.571-201ENST00000384753 98 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 MIR589-201ENST00000385238 99 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 Y_RNA.586-201ENST00000391146 98 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 HMGB3P8-201ENST00000449709 577 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 RPL30P5-201ENST00000494923 336 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 RNU6-1282P-201ENST00000516735 96 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 AC021231.3-201ENST00000558497 370 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 MIR6134-201ENST00000617606 109 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 AC026523.2-201ENST00000625039 7739 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 AL109809.4-201ENST00000603520 2185 ntBASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.15□□□□□ -1.59
PRPF38BQ5VTL8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 RNU6-884P-201ENST00000363889 107 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 SNORA73.2-201ENST00000364946 201 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 RNU6-1280P-201ENST00000365211 107 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 SNORA70.6-201ENST00000383934 134 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 FTH1P15-201ENST00000406984 280 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 FTH1P6-201ENST00000430768 320 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 AC112220.1-201ENST00000434628 355 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 AL356535.1-201ENST00000440335 398 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 AC091868.1-201ENST00000508746 304 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 RNU6-191P-201ENST00000516295 94 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 AC233702.2-202ENST00000562547 291 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 AC055872.1-201ENST00000570978 278 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 MIR6852-201ENST00000621699 66 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 AC092628.2-201ENST00000622492 339 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 AC110491.1-201ENST00000562191 2010 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 MTND5P35-201ENST00000557537 1720 ntBASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PRPF38BQ5VTL8 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 AC092268.1-201ENST00000342691 405 ntBASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 Y_RNA.179-201ENST00000363844 90 ntBASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 RNU1-132P-201ENST00000364300 164 ntBASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 RNA5SP72-201ENST00000364442 117 ntBASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 SNORA7.2-201ENST00000364446 145 ntBASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 Y_RNA.353-201ENST00000365440 108 ntBASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 RN7SKP61-201ENST00000410642 295 ntBASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 IFNA11P-201ENST00000446352 526 ntBASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 AC083899.1-201ENST00000454465 3819 ntBASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 AC090602.1-201ENST00000469695 252 ntBASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 RNU5F-8P-201ENST00000515941 111 ntBASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 CYCSP23-201ENST00000519781 313 ntBASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF38BQ5VTL8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms