Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 MIR412-201ENST00000362142 91 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 Y_RNA.251-201ENST00000364551 99 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 COX6CP13-201ENST00000428703 226 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 CYCSP32-201ENST00000440548 321 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 AL450023.3-201ENST00000440592 271 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 AL121914.1-201ENST00000450188 156 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 SCARNA8-201ENST00000515924 131 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 RNU6-1061P-201ENST00000516530 99 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 RPL23AP53-201ENST00000521854 457 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 AC133485.4-201ENST00000561835 220 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 AC138907.4-201ENST00000570107 226 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 MIR3646-201ENST00000578301 84 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 SNORD84-203ENST00000584275 78 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 AC005255.1-201ENST00000593748 216 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 VN1R85P-201ENST00000601587 426 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 AL360181.4-201ENST00000621752 134 ntBASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 AC068700.1-201ENST00000565862 3754 ntBASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 RNU6-640P-201ENST00000363693 105 ntBASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 RNU6-1164P-201ENST00000364428 107 ntBASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 MIR10A-201ENST00000385043 110 ntBASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 MTHFD2P2-201ENST00000407725 247 ntBASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 AL158156.1-201ENST00000422509 473 ntBASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 RNU6-155P-201ENST00000516347 100 ntBASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 MIR3138-201ENST00000585238 82 ntBASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 MIR8069-1-201ENST00000616627 86 ntBASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 MIR8069-2-201ENST00000621412 86 ntBASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.09□□□□□ -1.59
CTC1Q2NKJ3 SALL4P2-201ENST00000423288 2910 ntBASIC5.09□□□□□ -1.6
CTC1Q2NKJ3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
CTC1Q2NKJ3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 RNA5SP28-201ENST00000363841 119 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 Y_RNA.319-201ENST00000365138 92 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 Y_RNA.348-201ENST00000365403 103 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 RNU6-643P-201ENST00000384018 107 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 MIR487A-201ENST00000385009 80 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 AL645608.4-201ENST00000423619 154 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 AC000111.2-201ENST00000448200 210 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 IFNWP4-201ENST00000453148 294 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 AC106785.1-201ENST00000565935 262 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 Y_RNA.757-201ENST00000578934 114 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 AL391813.1-201ENST00000603098 260 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 AC019206.1-201ENST00000621938 425 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 AC063976.2-201ENST00000425667 3556 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 AL139811.1-201ENST00000424779 2299 ntBASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
CTC1Q2NKJ3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTC1Q2NKJ3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CTC1Q2NKJ3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTC1Q2NKJ3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTC1Q2NKJ3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTC1Q2NKJ3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTC1Q2NKJ3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CTC1Q2NKJ3 RNU1-64P-201ENST00000365443 163 ntBASIC5.07□□□□□ -1.6
CTC1Q2NKJ3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CTC1Q2NKJ3 Y_RNA.584-201ENST00000391090 114 ntBASIC5.07□□□□□ -1.6
CTC1Q2NKJ3 AL357515.1-201ENST00000402967 542 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms