Protein–RNA interactions for Protein: Q15059

BRD3, Bromodomain-containing protein 3, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3Q15059 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.33□□□□□ -1.88
BRD3Q15059 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.33□□□□□ -1.88
BRD3Q15059 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.33□□□□□ -1.88
BRD3Q15059 RPS15AP11-201ENST00000594193 385 ntBASIC3.33□□□□□ -1.88
BRD3Q15059 AC012493.2-201ENST00000595083 291 ntBASIC3.33□□□□□ -1.88
BRD3Q15059 ATP1B3P1-201ENST00000605365 821 ntBASIC3.33□□□□□ -1.88
BRD3Q15059 AC123912.5-201ENST00000605470 343 ntBASIC3.33□□□□□ -1.88
BRD3Q15059 AL021997.1-201ENST00000605757 193 ntBASIC3.33□□□□□ -1.88
BRD3Q15059 RNU6-6P-201ENST00000606623 107 ntBASIC3.33□□□□□ -1.88
BRD3Q15059 MIR92B-201ENST00000607575 96 ntBASIC3.33□□□□□ -1.88
BRD3Q15059 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.33□□□□□ -1.88
BRD3Q15059 AC012314.7-201ENST00000619693 93 ntBASIC3.33□□□□□ -1.88
BRD3Q15059 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.33□□□□□ -1.88
BRD3Q15059 MIR1321-201ENST00000637766 79 ntBASIC3.33□□□□□ -1.88
BRD3Q15059 AC068137.3-201ENST00000639191 341 ntBASIC3.33□□□□□ -1.88
BRD3Q15059 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BRD3Q15059 Z75746.1-201ENST00000440243 2080 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BRD3Q15059 RNU6-487P-201ENST00000365430 104 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 Y_RNA.554-201ENST00000384672 102 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 RNA5SP171-201ENST00000391071 115 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 RPL21P75-201ENST00000396599 483 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 RPL21P28-201ENST00000401418 483 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 SNORD88.1-201ENST00000408684 91 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 RNU6-908P-201ENST00000410160 94 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 RNU6-1068P-201ENST00000410958 103 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.32□□□□□ -1.88
BRD3Q15059 BX276092.3-201ENST00000424182 230 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 C8orf59P1-201ENST00000429930 303 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.32□□□□□ -1.88
BRD3Q15059 GSTA11P-201ENST00000452866 669 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 RPL21P39-201ENST00000463605 483 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 RN7SL499P-201ENST00000481141 276 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 AC087190.1-201ENST00000484462 480 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 AC093591.1-201ENST00000491435 481 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 AC018437.1-201ENST00000492214 406 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 RPL21P16-201ENST00000495531 483 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.32□□□□□ -1.88
BRD3Q15059 SNORA25.11-201ENST00000515935 105 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 RNU6-1038P-201ENST00000516516 104 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.32□□□□□ -1.88
BRD3Q15059 CENPUP1-201ENST00000526649 1202 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.32□□□□□ -1.88
BRD3Q15059 AC079598.5-201ENST00000547460 117 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 AC011611.1-201ENST00000552179 197 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 OR11H5P-201ENST00000554039 926 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 AL118558.2-201ENST00000556294 238 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 MIR4444-1-201ENST00000581696 74 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 MIR4444-2-201ENST00000584390 74 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 VN1R80P-201ENST00000597126 338 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BRD3Q15059 AL355365.1-201ENST00000616480 294 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 U4.5-201ENST00000617137 123 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 AC244517.12-201ENST00000623581 663 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 AC098679.4-201ENST00000624241 654 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 MIR6733-201ENST00000635723 61 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
BRD3Q15059 AL355596.1-201ENST00000565399 3996 ntBASIC3.32□□□□□ -1.88
BRD3Q15059 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
BRD3Q15059 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BRD3Q15059 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.31□□□□□ -1.88
BRD3Q15059 RNU6-220P-201ENST00000390919 107 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 AL031121.1-201ENST00000406553 254 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.31□□□□□ -1.88
BRD3Q15059 RNU2-25P-201ENST00000411041 191 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 RPLP0P7-201ENST00000416050 667 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 MTCO1P21-201ENST00000416634 589 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 USP9YP27-201ENST00000418455 438 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 AC097463.2-201ENST00000421074 142 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.31□□□□□ -1.88
BRD3Q15059 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.31□□□□□ -1.88
BRD3Q15059 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.31□□□□□ -1.88
BRD3Q15059 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 MTND3P16-201ENST00000452205 344 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 PRSS3P4-201ENST00000453323 162 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.31□□□□□ -1.88
BRD3Q15059 AC096576.1-201ENST00000489014 359 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 AC082651.2-201ENST00000496833 166 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 MTCYBP40-201ENST00000509390 1135 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 AC091826.1-201ENST00000514065 313 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 SNORD60.2-201ENST00000516883 86 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 SNORA31.23-201ENST00000517219 133 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 AC069113.1-201ENST00000517763 267 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 HSPE1P20-201ENST00000538133 289 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.31□□□□□ -1.88
BRD3Q15059 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.31□□□□□ -1.88
BRD3Q15059 AL121917.1-203ENST00000605534 577 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 AC004492.1-201ENST00000607036 742 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 AC096772.1-201ENST00000609146 564 ntBASIC3.31□□□□□ -1.88
BRD3Q15059 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.31□□□□□ -1.88
BRD3Q15059 FER-210ENST00000628534 558 ntTSL 5 BASIC3.31□□□□□ -1.88
BRD3Q15059 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
BRD3Q15059 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
BRD3Q15059 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.31□□□□□ -1.88
BRD3Q15059 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
BRD3Q15059 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BRD3Q15059 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
BRD3Q15059 RNU6-82P-201ENST00000363970 107 ntBASIC3.3□□□□□ -1.88
BRD3Q15059 RNU6-1090P-201ENST00000364065 94 ntBASIC3.3□□□□□ -1.88
BRD3Q15059 MIR514A2-201ENST00000385131 88 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms