Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.35□□□□□ -2.19
FOXF1Q12946 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.35□□□□□ -2.19
FOXF1Q12946 AL356432.3-201ENST00000568952 465 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 ROCK1P1-201ENST00000573767 549 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
FOXF1Q12946 MIR3167-201ENST00000579623 85 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AP001004.1-201ENST00000582468 324 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.35□□□□□ -2.19
FOXF1Q12946 AC005261.5-201ENST00000596280 355 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.35□□□□□ -2.19
FOXF1Q12946 MTCYBP22-201ENST00000603788 447 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AL138963.2-201ENST00000605137 226 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.35□□□□□ -2.19
FOXF1Q12946 AC090970.3-201ENST00000612566 866 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AL109620.1-201ENST00000618738 1197 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.35□□□□□ -2.19
FOXF1Q12946 FRG1KP-201ENST00000623592 341 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AC106754.1-201ENST00000562632 1513 ntBASIC1.35□□□□□ -2.19
FOXF1Q12946 AP000648.3-201ENST00000623539 4507 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
FOXF1Q12946 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
FOXF1Q12946 Y_RNA.46-201ENST00000362695 102 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 SNORD113-6-201ENST00000363345 75 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 RNU4-13P-201ENST00000364019 141 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 Y_RNA.302-201ENST00000364997 102 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 RNU6-658P-201ENST00000384606 106 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 AL356432.1-201ENST00000405809 419 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 RNU6-174P-201ENST00000410406 106 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 AC074117.2-201ENST00000417130 397 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 AL353621.1-201ENST00000418219 243 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.34□□□□□ -2.19
FOXF1Q12946 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.34□□□□□ -2.19
FOXF1Q12946 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.34□□□□□ -2.19
FOXF1Q12946 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.34□□□□□ -2.19
FOXF1Q12946 RPL7P34-201ENST00000433316 712 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 CR769776.1-201ENST00000441254 787 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.34□□□□□ -2.19
FOXF1Q12946 MTND2P39-201ENST00000457230 764 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.34□□□□□ -2.19
FOXF1Q12946 AC107032.1-201ENST00000485945 480 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 RNA5SP137-201ENST00000516833 135 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.34□□□□□ -2.19
FOXF1Q12946 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.34□□□□□ -2.19
FOXF1Q12946 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.34□□□□□ -2.19
FOXF1Q12946 MIR3126-201ENST00000577443 74 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 MIR3146-201ENST00000580367 79 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 AC103987.3-201ENST00000582071 292 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 AL365204.3-201ENST00000612448 685 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.34□□□□□ -2.19
FOXF1Q12946 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
FOXF1Q12946 AC138627.2-201ENST00000624202 601 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 AL136313.1-201ENST00000624804 202 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 OR4G3P-201ENST00000633500 913 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 MTND5P42-201ENST00000637720 498 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 AC103706.2-201ENST00000638080 240 ntBASIC1.34□□□□□ -2.19
FOXF1Q12946 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
FOXF1Q12946 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
FOXF1Q12946 U8.10-201ENST00000384260 133 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 Y_RNA.534-201ENST00000384599 112 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 RNU6-997P-201ENST00000384725 107 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 MIR301A-201ENST00000385261 86 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
FOXF1Q12946 MIR1302-8-201ENST00000408342 128 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 ELOCP17-201ENST00000414751 326 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.33□□□□□ -2.2
FOXF1Q12946 AL022400.1-201ENST00000423946 935 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 NEFMP1-201ENST00000443423 1006 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.33□□□□□ -2.2
FOXF1Q12946 CYP2C59P-201ENST00000457790 269 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 SNORD11.1-201ENST00000459482 85 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.33□□□□□ -2.2
FOXF1Q12946 AC034244.1-201ENST00000507687 207 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 RN7SKP219-201ENST00000516825 296 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 RNU6-143P-201ENST00000516942 93 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 AC009902.1-201ENST00000519351 183 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 CBX3P7-201ENST00000532876 502 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 AL121821.2-201ENST00000556081 394 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 AC012435.1-202ENST00000568772 240 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 TMF1P1-201ENST00000576058 373 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.33□□□□□ -2.2
FOXF1Q12946 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.33□□□□□ -2.2
FOXF1Q12946 MIR4999-201ENST00000585029 91 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.33□□□□□ -2.2
FOXF1Q12946 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.33□□□□□ -2.2
FOXF1Q12946 BNIP3P9-201ENST00000603714 553 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 AC007363.1-201ENST00000604736 620 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 AC013244.3-201ENST00000605614 388 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 AL391813.2-201ENST00000609113 322 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 MIR5739-201ENST00000619803 80 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 AC007490.1-201ENST00000624321 703 ntBASIC1.33□□□□□ -2.2
FOXF1Q12946 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.32□□□□□ -2.2
FOXF1Q12946 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.32□□□□□ -2.2
FOXF1Q12946 SNORD115.1-201ENST00000391109 76 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 RPS12P24-201ENST00000412619 387 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 OR51A5P-201ENST00000415429 942 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 EDDM3CP-201ENST00000415977 425 ntBASIC1.32□□□□□ -2.2
FOXF1Q12946 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.32□□□□□ -2.2
FOXF1Q12946 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms