Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 SMIM11P1-201ENST00000369586 178 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 RNU6-606P-201ENST00000384721 111 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 MIR514A1-201ENST00000385133 98 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 MIR1290-201ENST00000408735 78 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 RNU2-39P-201ENST00000410604 198 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 RNA5SP184-201ENST00000411071 108 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.18□□□□□ -2.06
CKAP4Q07065 AL451054.2-201ENST00000420896 202 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 NDUFB4P7-201ENST00000423198 363 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AC008850.1-201ENST00000427546 362 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.18□□□□□ -2.06
CKAP4Q07065 MTATP6P16-201ENST00000434543 526 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 MTATP6P13-201ENST00000438531 667 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.18□□□□□ -2.06
CKAP4Q07065 CBWD4P-201ENST00000445695 655 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.18□□□□□ -2.06
CKAP4Q07065 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.18□□□□□ -2.06
CKAP4Q07065 AC126389.1-201ENST00000477436 290 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 RN7SL274P-201ENST00000492268 272 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AC008413.1-201ENST00000511864 177 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 SCARNA15.2-201ENST00000516409 127 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 Y_RNA.693-201ENST00000516641 110 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 RN7SKP258-201ENST00000517151 304 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AP006587.4-201ENST00000526053 529 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 ATP5F1P5-201ENST00000526403 760 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AK6P1-201ENST00000540219 478 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.18□□□□□ -2.06
CKAP4Q07065 AL512310.1-201ENST00000548639 172 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AC024619.4-201ENST00000580924 316 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.18□□□□□ -2.06
CKAP4Q07065 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.18□□□□□ -2.06
CKAP4Q07065 AL121992.2-201ENST00000606262 256 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AP001486.3-201ENST00000615334 372 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AC245884.12-201ENST00000615364 59 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AC098657.3-201ENST00000620434 263 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AC139792.3-201ENST00000623525 224 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AC073308.1-201ENST00000623696 305 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CKAP4Q07065 CTSLP2-204ENST00000629029 392 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.18□□□□□ -2.06
CKAP4Q07065 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CKAP4Q07065 AC073346.2-201ENST00000624724 2058 ntBASIC2.18□□□□□ -2.06
CKAP4Q07065 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CKAP4Q07065 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
CKAP4Q07065 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CKAP4Q07065 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.17□□□□□ -2.06
CKAP4Q07065 RNU6-188P-201ENST00000364207 107 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 Y_RNA.372-201ENST00000365599 102 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 RNU6-1035P-201ENST00000384477 107 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 RNU6-14P-201ENST00000384630 106 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 MIR454-201ENST00000390180 115 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 RNU6-780P-201ENST00000391030 104 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 SNORA48.7-201ENST00000391302 135 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AL122016.1-201ENST00000403365 367 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 NDUFS5P1-201ENST00000405668 289 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 RNU2-40P-201ENST00000410833 196 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.17□□□□□ -2.06
CKAP4Q07065 NUP35P1-201ENST00000422734 947 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.17□□□□□ -2.06
CKAP4Q07065 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.17□□□□□ -2.06
CKAP4Q07065 USP9YP8-201ENST00000441913 500 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 IFNA11P-201ENST00000446352 526 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.17□□□□□ -2.06
CKAP4Q07065 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.17□□□□□ -2.06
CKAP4Q07065 RPS20P20-201ENST00000460498 340 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.17□□□□□ -2.06
CKAP4Q07065 RNA5SP281-201ENST00000516504 135 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 SNORA31.18-201ENST00000517043 134 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 RNU6-840P-201ENST00000517275 65 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.17□□□□□ -2.06
CKAP4Q07065 OR5AQ1P-201ENST00000527596 927 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AP001646.1-201ENST00000527936 915 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AC104383.1-201ENST00000530297 370 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.17□□□□□ -2.06
CKAP4Q07065 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.17□□□□□ -2.06
CKAP4Q07065 AL157687.1-201ENST00000554853 619 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.17□□□□□ -2.06
CKAP4Q07065 AC068135.2-201ENST00000569293 1028 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.17□□□□□ -2.06
CKAP4Q07065 MIR3616-201ENST00000584070 92 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AC005498.1-201ENST00000592125 465 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AC012507.3-201ENST00000603556 477 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AL356280.1-201ENST00000603614 379 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AC007363.1-201ENST00000604736 620 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AC012468.1-201ENST00000604888 430 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AC090132.2-201ENST00000615881 347 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AC093648.1-201ENST00000623546 606 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.17□□□□□ -2.06
CKAP4Q07065 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.17□□□□□ -2.06
CKAP4Q07065 ZNF680P1-201ENST00000436625 1469 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.17□□□□□ -2.06
CKAP4Q07065 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.17□□□□□ -2.06
CKAP4Q07065 MTND5P17-201ENST00000418405 1603 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 ELF2P3-201ENST00000445099 1506 ntBASIC2.17□□□□□ -2.06
CKAP4Q07065 AC009487.4-201ENST00000624969 3585 ntBASIC2.16□□□□□ -2.06
CKAP4Q07065 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.16□□□□□ -2.06
CKAP4Q07065 Y_RNA.9-201ENST00000362354 101 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms