Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MTND4P23-201ENST00000447723 1363 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
NKX6-1P78426 UBE3AP2-201ENST00000429033 2259 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 RNU6-1188P-201ENST00000363795 107 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 Y_RNA.419-201ENST00000384041 102 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 RNU6-306P-201ENST00000384617 107 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 RNU6-328P-201ENST00000390887 106 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX6-1P78426 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.39□□□□□ -1.87
NKX6-1P78426 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.39□□□□□ -1.87
NKX6-1P78426 DAP3P1-201ENST00000441522 278 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 RPL30P15-201ENST00000457129 321 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 SNORD5.1-201ENST00000458800 75 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 AC008571.1-201ENST00000467232 300 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 AC074250.1-201ENST00000511117 192 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 ACA59.1-201ENST00000515966 143 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 RNU6-581P-201ENST00000516214 105 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 Y_RNA.701-201ENST00000516812 110 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 AC006199.1-201ENST00000548728 219 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.39□□□□□ -1.87
NKX6-1P78426 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.39□□□□□ -1.87
NKX6-1P78426 U3.45-201ENST00000607547 219 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 AC098657.3-201ENST00000620434 263 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.39□□□□□ -1.87
NKX6-1P78426 MTCO1P12-201ENST00000414273 1543 ntBASIC3.39□□□□□ -1.87
NKX6-1P78426 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NKX6-1P78426 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.39□□□□□ -1.87
NKX6-1P78426 KPNA2P1-201ENST00000458289 1591 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.38□□□□□ -1.87
NKX6-1P78426 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.38□□□□□ -1.87
NKX6-1P78426 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NKX6-1P78426 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.38□□□□□ -1.87
NKX6-1P78426 AL353746.1-201ENST00000566293 6881 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 RNU6-428P-201ENST00000362942 107 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 RNU6-942P-201ENST00000363002 107 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 SNORD116-29-201ENST00000384516 83 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 MIR634-201ENST00000385208 97 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 SNORA75.4-201ENST00000391278 119 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 PTMAP5-201ENST00000393073 333 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 AL513475.1-201ENST00000406602 315 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 RNU6-1245P-201ENST00000411130 106 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 RNU6-1304P-201ENST00000411374 106 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX6-1P78426 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.38□□□□□ -1.87
NKX6-1P78426 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX6-1P78426 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX6-1P78426 HMGB1P37-201ENST00000439613 609 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX6-1P78426 AC133134.1-201ENST00000466800 359 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 AC026782.1-201ENST00000512952 449 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 SNORD59.2-201ENST00000516873 68 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 AC022634.1-201ENST00000520765 532 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX6-1P78426 CR383656.8-201ENST00000549046 145 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 AC005476.1-201ENST00000554427 397 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 VN1R107P-201ENST00000601784 209 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 AP000654.2-201ENST00000605633 586 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 AC244205.2-202ENST00000635781 342 ntBASIC3.38□□□□□ -1.87
NKX6-1P78426 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NKX6-1P78426 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.38□□□□□ -1.87
NKX6-1P78426 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
NKX6-1P78426 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX6-1P78426 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.38□□□□□ -1.87
NKX6-1P78426 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
NKX6-1P78426 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX6-1P78426 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX6-1P78426 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX6-1P78426 AC091152.2-201ENST00000591628 2569 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX6-1P78426 RNU1-105P-201ENST00000363470 161 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 RNU6-1317P-201ENST00000364582 104 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 U8.11-201ENST00000384699 133 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 U8.12-201ENST00000384701 133 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 Y_RNA.594-201ENST00000410373 140 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX6-1P78426 SYF2P2-201ENST00000417620 583 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 AL139247.1-201ENST00000422768 325 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 AC236972.1-201ENST00000433225 199 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 AL161651.1-201ENST00000440882 223 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX6-1P78426 U8.18-201ENST00000459285 133 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 RPL21P11-201ENST00000461458 483 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 MRPL42P6-201ENST00000486397 371 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 RPL31P61-201ENST00000496160 376 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX6-1P78426 MTCYBP40-201ENST00000509390 1135 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX6-1P78426 RNU6-307P-201ENST00000516743 106 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 SNORD19.2-201ENST00000516978 73 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX6-1P78426 AL356055.1-201ENST00000602528 446 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 CYP2C61P-201ENST00000604072 290 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 AC009229.3-201ENST00000608056 282 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 XIST_intron.1-201ENST00000619444 68 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 AL669831.3-213ENST00000636676 183 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 U6.98-201ENST00000637157 84 ntBASIC3.37□□□□□ -1.87
NKX6-1P78426 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NKX6-1P78426 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
NKX6-1P78426 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NKX6-1P78426 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms